Scientific Computing and Data / Mount Sinai Data Warehouse / Training, Tutorials, and Documentation
NEW! AIR·MS Fall 2026 Training
Three Sessions | 10–11 am
On Zoom and In Person: Annenberg Classroom 10-70
Register here
Session 1: Getting Started with AIR·MS: Health Data Fundamentals
- Tuesday, September 15: SLIDES AND VIDEO NOW AVAILABLE: (powerpoint slides parts A, B, and C) (video recording)
Session 2: From AI Agents to AIR·MS: Leveraging Large Language Models
- Tuesday September 22
Session 3: Advanced AIR·MS: Data Modalities and AI/Machine Learning (ML) Applications
- Tuesday September 24
NEW! Data2Evidence Fall 2026 Training and Office Hours
September/October 2026
- Wednesday September 2nd (2:00-3:00 PM EST):
- SLIDES AND VIDEO NOW AVAILABLE: (powerpoint slides) (video recording)
- Tuesday September 8th (12:00-1:00 PM EST):
- SLIDES AND VIDEO NOW AVAILABLE: (powerpoint slides) (video recording)
- Tuesday September 29th (3:00-4:00 PM EST):
- In-Person (Annenberg 10-72): Register here
- Zoom Session 3
- Wednesday October 7th (9:00-10:00 AM EST):
- In-Person (Annenberg 10-70): Register here
- Zoom Session 4
Understanding Electronic Health Record (EHR) Data
Principal Data Architect Timothy Quinn, PhD, has developed informative presentations on OMOP Vocabulary Tables and Electronic Health Record (EHR) Data in MSDW:
- March 26, 2025 – “Leveraging Electronic Health Records for Data Analysis and Reporting” Presentation Recording
- March 26, 2025 – “Leveraging Electronic Health Records for Data Analysis and Reporting” PowerPoint Slide Deck
- November 29, 2022 – “Terminology Mappings for MSDW OMOP” PowerPoint Slide Deck
- November 2, 2022 – “OMOP Vocabulary Tables Overview” PowerPoint Slide Deck
- June 16, 2022 – “Understanding EHR Data in MSDW” PowerPoint Slide Deck
- June 16, 2022 – “Understanding EHR Data in MSDW” Presentation Recording
Mount Sinai’s Epic electronic health record (EHR) system constitutes the primary data source for the Mount Sinai Data Warehouse. Data are also loaded from other ancillary systems.
Application Training
*Please note: to watch training videos off-campus users must be on VPN.
- De-identified Digital Pathology Training Session
- Epic Research Training
- Leaf/ATLAS Application Training
- March 5, 2025 – PowerPoint Slide Deck
- March 5, 2025 – Video Recording
- October 10, 2024 – PowerPoint Slide Deck
- October 10, 2024 – Video Recording
- January 17, 2024 – PowerPoint Slide Deck
- January 17, 2024 – Video Recording
- October 11, 2023 – PowerPoint Slide Deck
- October 11, 2023 – Video Recording
- February 23, 2023 – PowerPoint Slide Deck
- February 23, 2023 – Video Recording
- October 12, 2022 – PowerPoint Slide Deck
- May 4, 2022 – PowerPoint Slide Deck
- November 3, 2021 – PowerPoint Slide Deck
- November 3, 2021 – Video Recording
Tutorials
Each tool has a specific set of features and functions. Check out these tutorials for our software tools to assist you:
Documentation
Presentations
For MSDW-related presentation recordings and materials, see Presentations.
Reports
For publications, user reports, annual reports, and surveys, see Annual Reports and User Surveys.
Still having trouble? Submit a ticket and we will respond quickly.
We are supported by grant UL1TR004419 from the National Center for Advancing Translational Sciences, National Institutes of Health.
