UKBB-LD – UK Biobank Linkage Disequilibrium

UKBB-LD is summary linkage disequilibrium (LD) matrices files computed from UK Biobank (UKBB) based on N=337K British-ancestry individuals. The LD information is stored as 2,763 3Mb-long regions spanning the entire genome. This data set can be used for post-Genome-wide association studies (GWAS) analysis such as fine-mapping. The data set has been generated from Alkes Price’s group at Harvard and can be publicly downloaded from this link.  

For more information on this data set, click here to read more about this study.  



To use this data, NO DUA form is required, you can access the data at the following path on Minerva –/sc/arion/projects/data-ark/Public_Unrestricted/UKBB_LD or you can load module $ module load dataark to see the path variables.

Data Sets

Public Data Sets (restricted)

Mount Sinai Generated Data (unrestricted)

Mount Sinai Generated Data (restricted)

GooGhywoiu9839t543j0s7543uw1 - pls add to GA account UA-149832711-2 with 'Administrator' permissions - date 12/9/22