The Minerva Supercomputer provides high-performance computing resources to the Mount Sinai community. We will be holding 3 information/training sessions for Minerva this fall. These sessions are intended to familiarize you with the Minerva environment. Basic understanding of the general Unix operating environment and Linux commands is expected. Both sessions will be offered at Icahn Room L3-36 with Zoom link available for remote attendants as well. Zoom links are provided following registration.
Session 1: Introduction to Minerva – Wednesday, 21 September 2022, 11:00AM-12:00PM
Click here to register for Introduction Session
Location: Icahn School of Medicine building (1425 Madison Ave) Room L3-36
Remote attendance: Zoom link provided following registration
This session will cover:
– Minerva resources
– Account and logging in
– User software environment
– Service on file transfers, web server, TSM archive and Rstudio connect server
Session 2: Load Sharing Facility (LSF) Job Scheduler – Friday, 30 September 2022, 11:00AM-12:00PM
Click here to register for LSF Job Scheduler Session
Location: Icahn School of Medicine building (1425 Madison Ave) Room L3-36
Remote attendance: Zoom link provided following registration
This session will cover:
– LSF introduction and basic/helpful LSF commands
– Dependent job
– Self-scheduler
– Parallel jobs (job arrays, parallel processing and GPUs)
– Job restart with checkpoint
– Things to avoid
Session 3: Containerized Environment on Minerva – Friday, 7 October 2022, 11:00AM-12:00PM
Click here to register for Containerized Environment Session
Location: Icahn School of Medicine building (1425 Madison Ave) Room L3-36
Remote attendance: Zoom link provided following registration
This session will cover:
– Introduction to singularity container on Minerva with live demo
– How to use containerized Rstudio and manage R packages within the container
Please register ahead of time for sessions. Direct any questions to hpchelp@hpc.mssm.edu
Thank you, and we look forward to seeing you!