Computational and Mathematical Methods to Study the Complexity of Regulatory Networks in Mammalian Cells
The Ma’ayan Laboratory applies machine learning and other statistical mining techniques to study how intracellular regulatory systems function as networks to control cellular processes such as differentiation, dedifferentiation, apoptosis and proliferation.
Our research team develops software systems to help experimental biologists form novel hypotheses from high-throughput data, while aiming to better understand the structure and function of regulatory networks in mammalian cellular and multi-cellular systems. Read More
The COVID-19 Drug and Gene Set Library is a collection of drug and gene sets related to COVID-19 research from multiple sources. The platform enables users to view, download, analyze, visualize, and contribute drug and gene sets related to COVID-19 research. To evaluate the content of the library, we compared the results from six in vitro drug screens for COVID-19 repurposing candidates. Surprisingly, we observe low overlap across screens while highlighting overlapping candidates that should receive more attention as potential therapeutics for COVID-19. Read More
Citation: Kuleshov MV, Stein DJ, Clarke DJB, Kropiwnicki E, Jagodnik KM, Bartal A, Evangelista JE, Hom J, Cheng M, Bailey A, Zhou A, Ferguson LB, Lachmann A, Ma’ayan A. The COVID-19 Drug and Gene Set Library. Patterns (2020) 100090.
- COVID-19 Crowd Generated Gene and Drug Set Library Tutorial
- Analysis and Visualization of SARS-CoV-2 Gene Expression Signatures
- Appyter for Visualization and Characterization of Cancer Patient Clusters based on RNA-Seq Profiles
- October 10: 5th Annual LymeMIND Virtual Conference 2020