Software tools

Multiscale Network Analysis

  • Link to presentation: PDF

 Multiscale Network Modeling in Alzheimer’s Disease

  • Link to presentation: PDF

 Key Driver Analysis

  • Link to presentation: PDF
  • Link to demo presentation: PDF
  • Link to paper: PDF
  • Link to R package: ZIP(windows), GZ(Linux)

 MEGENA: Multiscale Embeded Gene coExpression Network Analysis

 SuperExactTest: Efficient Test and Visualization of Multi-Set Intersections

NetWeaver: Graphic Presentation of Complex Genomic and Network Data Analysis

sunburst.shiny: R/Shiny App for Interactive Visualization of Sunburst Network Hierarchy


Mount Sinai cohort of large-scale genomic, transcriptomic and proteomic data in Alzheimer’s disease