Publications

For more information on publications, view Dr. Bunyavanich’s PubMed profile.

Machine learning-driven identification of early-life air toxic combinations associated with childhood asthma outcomes.
Li Y, Hsu H, Chun Y, Chiu P, Arditi Z, Claudio L, Pandey G, Bunyavanich S.
Journal of Clinical Investigation. 2021 Oct 5. https://doi.org/10.1172/JCI152088.
PMID: 34609967

Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children.
Beckmann ND, Comella PH, Cheng E…Tyler S….Do ABunyavanich S…Schadt EE, Charney AW.
Nature Communications. 2021 Aug 11;12(1):4854.
PMID: 34381049

The Effect of Age on T-Regulatory Cell Number and Function in Patients With Asthma.
Birmingham JM, Chesnova B, Wisnivesky JP, Calatroni A, Federman J, Bunyavanich S, Busse PJ.
Allergy Asthma Immunology Research. 2021 Jul;13(4):646-654.
PMID: 34212550

Comparison of dietary intake between milk-allergic and non-food-allergic children.
Gibson K, Stanley S, Agarwal S, Groetch M, Bunyavanich S.
Pediatric Allergy and Immunology. 2021 Jun 22. doi: 10.1111/pai.13581.
PMID: 34155703

Merged Affinity Network Association Clustering: Joint multi-omic/clinical clustering to identify disease endotypes.
Tyler SR, Chun Y, Ribeiro VM, Grishina G, Grishin A, Hoffman GE, Do AN, Bunyavanich S.
Cell Reports. 2021 Apr 13;35(2):108975. doi: 10.1016/j.celrep.2021.108975.
PMID: 33852839

Multi-dimensional study of the oral microbiome, metabolite, and immunologic environment in peanut allergy.
Ho HE, Chun Y, Jeong S, Jumreornvong O, Sicherer SH, Bunyavanich S.
Journal of Allergy and Clinical Immunology. 2021 Apr 2. doi: 10.1016/j.jaci.2021.03.028. Online ahead of print.
PMID: 33819506

Relationship of Pneumocystis antibody responses to paediatric asthma severity.
Rayens E, Noble B, Vicencio A, Goldman DL, Bunyavanich S, Norris KA.
BMJ Open Respir Res. 2021 Mar;8(1):e000842.
PMID: 33762359

The nasal microbiome, nasal transcriptome, and pet sensitization.
Chun Y, Do A, Grishina G, Arditi Z, Ribeiro V, Grishin A, Vicencio A, Bunyavanich S.
Journal of Allergy and Clinical Immunology. 2021 Jul;148(1):244-249.e4. Epub 2021 Feb 13.
PMID: 33592204

Current insights into the genetics of food allergy.
Kanchan K, Clay S, Irizar H, Bunyavanich S, Mathias R.
Journal of Allergy and Clinical Immunology. 2021 Jan; 147(1): 15-28.
PMID: 33436162

Peanut-induced food protein-induced enterocolitis syndrome (FPIES) in infants with early peanut introduction.
Lopes JP, Cox A, Baker MG, Bunyavanich S, Oriel R, Sicherer S, Nowak-Wegrzyn A, Kattan J.
J Allergy Clin Immunol Pract. 2021 May;9(5):2117-2119. Epub 2020 Dec 17.
PMID: 33346152

Peanut oral food challenges and subsequent feeding of peanuts in infants.
Jin H, Sifers T, Cox A, Kattan J, Bunyavanich S, Oriel R, Tsuang A, Wang J, Groetch M, Sicherer S, Nowak-Wegrzyn A.
J Allergy Clin Immunol Pract. 2021 Apr;9(4):1756-1758.e1. Epub 2020 Dec 5.
PMID: 33290919

Clinical features of COVID-19 mortality: development and validation of a clinical prediction model.
Yadaw AS, Li Y-C, Bose S, Iyengar R, Bunyavanich S, Pandey G.
Lancet Digital Health. 2020 Oct;2(10):e516-e525. Epub 2020 Sep 22.
PMID: 32984797

Racial/ethnic variation in nasal gene expression of transmembrane serine protease 2 (TMPRSS2).
Bunyavanich S, Grant C, Vicencio A.
JAMA. 2020 Oct 20;324(15):1567-1568.
PMID: 32910146

Network study of nasal transcriptome profiles reveals master regulator genes of asthma.
Do A, Chun Y, Grishina G, Grishin A, Rogers A, Raby B, Weiss S, Vicencio A, Schadt E, Bunyavanich S.
Journal of Allergy and Clinical Immunology. 2021 Mar;147(3):879-893. Epub 2020 Aug 20.
PMID: 32828590

Advancing food allergy through omics sciences.
Irizar H, Kanchan K, Mathias RA, Bunyavanich S. J Allergy Clin Immunol Pract. 2021 Jan;9(1):119-129. Epub 2020 Aug 7.
PMID: 32777389

Nasal gene expression of angiotensin-converting enzyme 2 in children and adults.
Bunyavanich S, Do A, Vicencio A.
JAMA. 2020 May 20;323(23):2427-9. doi: 10.1001/jama.2020.8707.
PMID: 32432657

Emerging Food Allergy Biomarkers.
Patil S, Bunyavanich S, Berin MC.
J Allergy Clin Immunol Pract. 2020 Sep;8(8):2516-2524.
PMID: 32888527

Integrative study of the upper and lower airway microbiome and transcriptome in asthma.
Chun Y, Do A, Grishina G, Grishin A, Fang G, Rose S, Spencer C, Vicencio A, Schadt E, Bunyavanich S.
JCI Insight. 2020 Mar 12;5(5):e133707.
PMID: 32161195

Dual transcriptomic and epigenomic study of reaction severity in peanut allergic children.
Do A, Watson C, Cohain A, Griffin R, Grishin A, Wood R, Burks AW, Jones S, Scurlock A, Leung D, Sampson H, Sicherer S, Sharp A, Schadt E, Bunyavanich S.
J Allergy Clin Immunol. 2020 Apr;145(4):1219-1230. Epub 2019 Dec 12.
PMID: 31838046

Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis.
Oliveira PH, Kim A, Sekulovic O, et al., Bunyavanich S, et al., Tamayo R, Shen A, Fang G.
Nat Microbiol. 2020 Jan;5(1):166-180. Epub 2019 Nov 25.
PMID: 31768029

Bronchoscopy in severe childhood asthma: irresponsible or irreplaceable?
Januska M, Goldman D, Webley W, Teague G, Cohen R, Bunyavanich S, Vicencio A.
Pediatr Pulmonol. 2020 Mar;55(3):795-802. Epub 2019 Nov 15.
PMID: 31730298

Food Allergy and the Microbiome: Current Understandings and Future Directions.
Bunyavanich S, Berin C.
J Allergy Clin Immunol. 2019 Dec;144(6):1468-1477.
PMID: 31812181

NeTFactor, a Framework for Identifying Transcriptional Regulators of Gene Expression-based Biomarkers.
Ahsen ME, Chun Y, Grishin A, Grishina G, Stolovitzky G, Pandey G, Bunyavanich S.
Sci Rep. 2019 Sep 10;9(1):12970.
PMID: 31506535

Endotoxin, Food Allergy Sensitization, and Food Allergy: A Complementary Epidemiologic and Experimental Study. Tsuang A, Grishin A, Grishina G, Do A, Sordillo J, Chew G, Bunyavanich S.
Allergy. 2020 Mar;75(3):625-635. Epub 2019 Oct 23.

PMID: 31535385

Leveraging -Omics for Asthma Endotyping.
Tyler S, Bunyavanich S.
J Allergy Clin Immunol. 2019 Jul;144(1):13-23.
PMID: 31277743

Racial, ethnic, and socioeconomic differences in adolescent food allergy.
Coulson E, Rifas-Shiman S, Sordillo J, Bunyavanich S, Camargo C, Platts-Mills T, Coull B, Luttmann-Gibson H, Oken E, Gold D, Rice M.
J Allergy Clin Immunol Pract. 2020 Jan;8(1):336-338.e3. Epub 2019 Jun 22.
PMID: 31233938

Not So Sweet: True Chocolate and Cocoa Allergy.
Lopes JP, Kattan J, Doppelt A, Nowak-Wegrzyn A, Bunyavanich S.
J Allergy Clin Immunol Pract. 2019 Nov-Dec;7(8):2868-2871. Epub 2019 Apr 26.
PMID: 31035001

Children with Severe Persistent Asthma Have Disparate Peripheral Blood and Lower Airway Eosinophil Levels.
Ribeiro V, Andrade J, Rose S, Spencer C, Vicencio A, Bunyavanich S.
J Allergy Clin Immunol Pract. 2019 Sep-Oct;7(7):2494-2496. Epub 2019 Mar 21.

PMID: 30904479

Microbial Adjuncts for Food Allergen Immunotherapy.
Ho H, Bunyavanich S.
Curr Allergy Asthma Rep. 2019 Mar 22;19(5):25.
PMID: 30903301

Food Allergy: Could Gut Microbiota Hold the Key?
Bunyavanich S.
Nat Rev Gastroenterol Hepatol. 2019 Apr;16(4):201-202.
PMID: 30824883

Perceived Versus Actual Aeroallergen Sensitization in Urban Children.
Pham MN, Andrade J, Mishoe M, Chun Y, Bunyavanich S.
J Allergy Clin Immunol Pract. 2019 May-Jun;7(5):1591-1598.e4. Epub 2019 Jan 14.
PMID: 30654198

The Gut Microbiome in Food Allergy.
Zhao W, Ho H, Bunyavanich S.
Ann Allergy Asthma Immunol. 2019 Mar;122(3):276-282. Epub 2018 Dec 20.
PMID: 30578857

Prenatal Diet and the Development of Childhood Allergic Diseases: Food for Thought.
Pham MN, Bunyavanich S.
Curr Allergy Asthma Rep. 2018 Sep 18;18(11):58.
PMID: 30229317

Genome-wide association study and HLA fine-mapping studies identify risk loci and genetic pathways underlying allergic rhinitis.
Waage J, Standl M, Curtin J, et al., Bunyavanich S, et al., Bisgaard H, Strachan D, Bonnelykke K.
Nat Genet. 2018 Aug;50(8):1072-1080. Epub 2018 Jul 16.
PMID: 30013184

A Nasal Brush-based Classifier of Asthma Identified by Machine Learning Analysis of Nasal RNA Sequence Data.
Pandey G, Pandey O, Rogers A, Ahsen M, Hoffman G, Raby B, Weiss S, Schadt E, Bunyavanich S.
Sci Rep. 2018 Jun 11;8(1):8826.
PMID: 29891868

Intestinal microbial-derived sphingolipids are associated with childhood food allergy.
Lee-Sarwar K, Kelly R, Lasky-Su J, Moody B, Mola A, Cheng T, Comstock L, Zeiger R, O’Connor G, Sandel M, Bacharier L, Beigelman A, Laranjo N, Gold D, Bunyavanich S, Savage J, Weiss S, Brennan P, Litonjua A.
J Allergy Clin Immunol. 2018 Jul;142(1):335-338.e9. Epub 2018 May 2.
PMID: 29729303

The Nasal Microbiome in Asthma.
Fazlollahi M, Lee T, Andrade J, Oguntuyo K, Chun Y, Grishina G, Grishin A, Bunyavanich S.
J Allergy Clin Immunol. 2018 Sep;142(3):834-843.e2. Epub 2018 Mar 5.
PMID: 29518419

Role of the Microbiome in Food Allergy.
Ho H, Bunyavanich S.
Curr Allergy Asthma Rep. 2018 Apr 5;18(4):27.
PMID: 29623445

Early-life gut microbiome and egg allergy. 
Fazlollahi M, Chun Y, Grishin A, Wood RA, Burks AW, Dawson P, Jones SM, Leung DYM, Sampson HA, Sicherer SH, Bunyavanich S.
Allergy. 2018 Jul;73(7):1515-1524. Epub 2018 Mar 15.
PMID: 29318631

Integrative transcriptomic analysis reveals key drivers of acute peanut allergic reactions.
Watson CT, Cohain AT, Griffin RS, Chun Y, Grishin A, Hacyznska H, Hoffman G, Beckmann N, Shah H, Dawson P, Henning A, Wood R, Burks AW, Jones S, Leung D, Sicherer S, Sampson H, Sharp A, Schadt E, Bunyavanich S.
Nature Communications. 2017 Dec 5, doi:10.1038/s41467-017-02188-7. PMID: 29203772

A Prospective Microbiome-wide Association Study of Food Sensitization and Food Allergy in Early Childhood.
Savage JH, Lee-Sarwar KA, Sordillo J, Bunyavanich S, Zhou Y, O’Connor G, Sandel M, Bacharier L, Zeiger R, Sodergren E, Weinstock GM, Gold DR, Weiss ST, Litonjua AA.
Allergy. 2018 Jan;73(1):145-152. Epub 2017 Aug 2.
PMID: 28632934

Partially Hydrolyzed Whey Formula Intolerance in Cow’s Milk Allergic Patients. 
Egan M, Lee T, Andrade J, Grishina G, Mishoe M, Gimenez G, Sampson HA, Bunyavanich S.
Pediatr Allergy Immunol. 2017 Jun;28(4):401-405.
PMID: 28339130

The Microbiome in Allergic Disease: Current Understandings and Future Opportunities. 2017 PRACTALL Document of the American Academy of Allergy, Asthma and Immunology and the European Academy of Allergy and Clinical Immunology.
Huang YJ, Marsland BJ, Bunyavanich S, O’Mahony L, Leung DY, Muraro A, Fleisher TA.
J Allergy Clin Immunol. 2017 Apr;139(4):1099-1110. Epub 2017 Feb 28.
PMID: 28257972

Early-life gut microbiome composition and milk allergy resolution.
Bunyavanich S, Shen N, Grishin A, Wood R, Burks W, Dawson P, Jones SM, Leung D, Sampson H, Sicherer S, Clemente JC.
J Allergy Clin Immunol. 2016 Oct;138(4):1122-1130. Epub 2016 May 10.
PMID: 27292825

Epinephrine Autoinjector Prescribing Patterns in an Urban Pediatric Population.
Sann J, Bunyavanich S, Wang J.
J Allergy Clin Immunol Pract. 2016 Sep-Oct;4(5):989-90. Epub 2016 Apr 27.
PMID: 27130713

Prenatal, perinatal, and childhood vitamin D exposure and their association with allergic rhinitis and allergic sensitization.
Bunyavanich S, Rifas-Shiman SL, Platts-Mills TA, Workman L, Sordillo JE, Gillman MW, Gold DR, Litonjua AA.
J Allergy Clin Immunol. 2016 Apr;137(4):1063-1070.e2. Epub 2016 Feb 10.
PMID: 26874366

Safety, costs and efficacy of rapid drug desensitizations to chemotherapy and monoclonal antibodies.
Sloane D, Govindarajulu U, Harrow-Mortelliti J, Barry W, Hsu F, Hong D, Laidlaw T, Palis R, Legere H, Bunyavanich S, Breslow R, Wesemann D, Barrett N, Brennan P, Chong HJ, Liu A, Fernandez J, Fanning L, Kyin T, Cahill K, Bankova L, Lynch S, Berlin S, Campos S, Fuchs C, Mayer R, Matulonis U, Castells M.
J Allergy Clin Immunol Pract. 2016 May-Jun;4(3):497-504. Epub 2016 Feb 16.
PMID: 26895621

Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis. 
Paternoster L, Standl M, et al., Bunyavanich S, et al., Evans DM, Weidinger S.
Nat Genet. 2015 Dec;47(12):1449-1456. Epub 2015 Oct 19.
PMID: 26482879

Genome-wide expression profiles identify potential targets for gene-environment interactions in asthma severity.
Sordillo JE, Kelly R, Bunyavanich S, McGeachie M, Qiu W, Croteau-Chonka DC, Soto-Quiros M, Avila L, Celedón JC, Brehm JM, Weiss ST, Gold DR, Litonjua AA.
J Allergy Clin Immunol. 2015 Oct;136(4):885-92.e2. Epub 2015 Apr 24.
PMID: 25913104

Allergic rhinitis: the “ghost diagnosis” in patients with asthma.
Egan M, Bunyavanich S.
Asthma Res Pract. 2015 Sep 7;1:8.
PMID: 27965762

Use of Inhaled Corticosteroids among Hispanics in the United States.
Bunyavanich S, Celedón JC.
Ann Am Thorac Soc. 2015 Feb;12(2):241-2.
PMID: 25706490 

Systems Biology of Asthma and Allergic Disease: A Multiscale Approach.
Bunyavanich S, Schadt EE.
J Allergy Clin Immunol. 2015 Jan;135(1):31-42. Epub 2014 Nov 21.
PMID: 25468194

Profile of a milk-allergic patient who tolerated partially hydrolyzed whey formula.
Lee TD, Gimenez G, Grishina G, Mishoe M, Sampson HA, Bunyavanich S.
J Allergy Clin Immunol Pract. 2015 Jan-Feb;3(1):116-8. Epub 2014 Aug 29.
PMID: 25577632

Integrated Genome-wide Association, Coexpression Network, and Expression Single Nucleotide Polymorphism Analysis Identifies Novel Pathway in Allergic Rhinitis.
Bunyavanich S, Schadt EE, Himes BE, Lasky-Su J, Qiu W, Lazarus R, Ziniti JP, Cohain A, Linderman M, Torgerson DG, Eng CS, Pino-Yanes M, Padhukasahasram B, Yang JJ, Mathias RA, Beaty TH, Li X, Graves P, Romieu I, Del Rio Navarro B, Salam MT, Vora H, Nicolae DL, Ober C, Martinez FD, Bleecker ER, Meyers DA, Gauderman WJ, Gilliland F, Burchard EG, Barnes KC, Williams LK, London SJ, Zhang B, Raby BA, Weiss ST.
BMC Med Genomics. 2014 Aug 2;7:48.
PMID: 25085501

Prenatal and infant exposure to acetaminophen and ibuprofen and the risk for wheeze and asthma in children.
Sordillo JE, Scirica CV, Rifas-Shiman SL, Gillman MW, Bunyavanich S, Camargo CA Jr, Weiss ST, Gold DR, Litonjua AA.
J Allergy Clin Immunol. 2015 Feb;135(2):441-8. Epub 2014 Oct 28.
PMID: 25441647

Peanut allergy prevalence among school-age children in a US cohort not selected for any disease.
Bunyavanich S, Rifas-Shiman SL, Platts-Mills TA, Workman L, Sordillo JE, Gillman MW, Gold DR, Litonjua AA.
J Allergy Clin Immunol. 2014 Sep;134(3):753-5. Epub 2014 Jul 30.
PMID: 25086866 

Peanut, milk, and wheat intake during pregnancy is associated with reduced allergy and asthma in children.
Bunyavanich S, Rifas-Shiman SL, Platts-Mills TA, Workman L, Sordillo JE, Camargo CA, Gillman MW, Gold DR, Litonjua AA.
J Allergy Clin Immunol. 2014 May;133(5):1373-82. Epub 2014 Feb 9.
PMID: 24522094

Immunotherapy for mouse bite anaphylaxis and allergy.
Bunyavanich S, Donovan MA, Sherry JM, Diamond DV.
Ann Allergy Asthma Immunol. 2013 Sep;111(3):223-4. Epub 2013 Jul 12.
PMID: 23987202 

A Twin Study of Early-Childhood Asthma in Puerto Ricans.
Bunyavanich S, Silberg JL, Lasky-Su J, Gillespie NA, Lange NE, Canino G, Celedon JC.
PLoS One. 2013 Jul 3;8(7):e68473.
PMID: 23844206

Hypersensitivity reaction to intravenous but not oral tacrolimus.
Nicolai S, Bunyavanich S.
Transplantation. 2012 Nov 15;94(9):e61-3.
PMID: 23128975

Unravelling gene-by-environment effects in asthma and allergy: the glutathione pathway as an early success story.
Rogers A, Bunyavanich S.
Clinical Experimental Allergy 2011 Nov; 41(11): 1502-4. PMID: 22093009

Gene-by-environment effect of house dust mite on purinergic receptor P2Y12 (P2RY12) and lung function in children with asthma.
Bunyavanich S, Boyce J, Raby B, Weiss S.
Clinical Experimental Allergy 2012 Feb; 42(2): 42(2). PMID: 22010907

A meta-analysis of Th2 pathway genetic variants and risk for allergic rhinitis.
Bunyavanich S, Shargorodsky J, Celedón J.
Pediatr Allergy Immunol. 2011 Jun;22(4):378-87. Epub 2011 Feb 10.
PMID: 21309855 

Thymic stromal lymphopoietin (TSLP) is associated with allergic rhinitis in children with asthma.
Bunyavanich S, Melen E, Wilk J, Granada M, Soto-Quiros M, Avila L, Lasky-Su J, Hunninghake G, Wickman M, Pershagen G, O’Connor G, Weiss S, Celedón J.
Clin Mol Allergy. 2011 Jan 18;9:1.
PMID: 21244681

Parental psychosocial stress and asthma morbidity in Puerto Rican twins.
Lange N, Bunyavanich S, Silberg J, Canino G, Rosner B, Celedón J.
J Allergy Clin Immunol. 2011 Mar;127(3):734-40.e1-7. Epub 2010 Dec 30.
PMID: 21194742

Risk factors for allergic rhinitis in Costa Rican children with asthma.
Bunyavanich S, Soto-Quiros M, Avila L, Laskey D, Senter J, Celedón J.
Allergy 2010 Feb; 65(2): 256-63. PMID: 19796208

The impact of climate change on child health.
Bunyavanich S, Landrigan C, McMichael A, Epstein P.
Ambul Pediatr. 2003 Jan-Feb;3(1):44-52.
PMID: 12540254 

US public health leaders shift toward a new paradigm of global health
Bunyavanich S, Walkup R.
American Journal of Public Health 2001 Oct; 91(10): 1556-8. PMID: 11574304