Publications

2016

  1. Chen P, Yi Z, Zhang W, Klotman ME, Chen BK. HIV infection-induced transcriptional program in renal tubular epithelial cells activates a CXCR2 driven CD4+ T cell chemotactic response. AIDS. 2016 May 9. [Epub ahead of print] PubMed PMID: 27163710.
  2. Perumal D, Kuo PY, Leshchenko VV, Jiang Z, Divakar SK, Cho HJ, Chari A, Brody J, Reddy MV, Zhang W, Reddy EP, Jagannath S, Parekh S. Dual Targeting of CDK4 and ARK5 Using a Novel Kinase Inhibitor ON123300 Exerts Potent Anticancer Activity against Multiple Myeloma. Cancer Res. 2016 Feb 12. [Epub ahead of print] PubMed PMID: 26873845.
  3. Zhou F, Wang W, Shen C, Li H, Zuo X, Zheng X, Yue M, Zhang C, Yu L, Chen M, Zhu C, Yin X, Tang M, Li Y, Chen G, Wang Z, Liu S, Zhou Y, Zhang F, Zhang W, Li C, Yang S, Sun L, Zhang X. Epigenome-Wide Association Analysis Identified Nine Skin DNA Methylation Loci for Psoriasis. J Invest Dermatol. 2016 Apr;136(4):779-87. doi: 10.1016/j.jid.2015.12.029. Epub 2015 Dec 29. PubMed PMID:26743604.
  4. Aguilo F, Li S, Balasubramaniyan N, Sancho A, Benko S, Zhang F, Vashisht A,Rengasamy M, Andino B, Chen CH, Zhou F, Qian C, Zhou MM, Wohlschlegel JA, Zhang W, Suchy FJ, Walsh MJ. Deposition of 5-Methylcytosine on Enhancer RNAs Enables the Coactivator Function of PGC-1α. Cell Rep. 2016 Jan 26;14(3):479-92. doi: 10.1016/j.celrep.2015.12.043. Epub 2016 Jan 7. PubMed PMID: 26774474; PubMed Central PMCID: PMC4731243.

2015

  1. International Genetics & Translational Research in Transplantation Network (iGeneTRAiN). Design and Implementation of the International Genetics and Translational Research in Transplantation Network. Transplantation. 2015 Nov;99(11):2401-12. doi: 10.1097/TP.0000000000000913.
  2. Zhou F, Wang W, Shen C, Li H, Zuo X, Zheng X, Yue M, Zhang C, Yu L, Chen M, Zhu C, Yin X, Tang M, Li Y, Chen G, Wang Z, Liu S, Zhou Y, Zhang F, Zhang W, Li C, Yang S, Sun L, Zhang X. Epigenome-wide association analysis identified nine skin DNA methylation loci for psoriasis. J Invest Dermatol. 2015 Dec 29. pii: S0022-202X(15)00325-5. doi: 10.1016/j.jid.2015.12.029. [Epub ahead of print] PubMed PMID: 26743604.
  3. Aguilo F, Zhang F, Sancho A, Fidalgo M, Di Cecilia S, Vashisht A, Lee DF, ChenCH, Rengasamy M, Andino B, Jahouh F, Roman A, Krig SR, Wang R, Zhang W,Wohlschlegel JA, Wang J, Walsh MJ. Coordination of m(6)A mRNA Methylation and Gene Transcription by ZFP217 Regulates Pluripotency and Reprogramming. Cell Stem Cell. 2015 Oct 27. pii: S1934-5909(15)00412-9. doi: 10.1016/j.stem.2015.09.005. [Epub ahead of print] PubMed PMID: 26526723.
  4. Tong J, Xie J, Ren H, Liu J, Zhang W, Wei C, Xu J, Zhang W, Li X, Wang W, LvD, He JC, Chen N. Comparison of Glomerular Transcriptome Profiles of Adult-OnsetSteroid Sensitive Focal Segmental Glomerulosclerosis and Minimal Change Disease.PLoS One. 2015 Nov 4;10(11):e0140453. doi: 10.1371/journal.pone.0140453. eCollection 2015. PubMed PMID: 26536600; PubMed Central PMCID: PMC4633097.
  5. Davidson A, Bethunaickan R, Berthier C, Sahu R, Zhang W, Kretzler M. Molecularstudies of lupus nephritis kidneys. Immunol Res. 2015 Dec;63(1-3):187-196. PubMedPMID: 26376897.
  6. Fu J, Wei C, Lee K, Zhang W, He W, Chuang P, Liu Z, He JC. Comparison of Glomerular and Podocyte mRNA Profiles in Streptozotocin-Induced Diabetes. J Am Soc Nephrol. 2015 Aug 11. pii: ASN.2015040421. [Epub ahead of print] PubMed PMID: 26264855.
  7. Fan Y, Xiao W, Li Z, Li X, Chuang PY, Jim B, Zhang W, Wei C, Wang N, Jia W, Xiong H, Lee K, He JC. RTN1 mediates progression of kidney disease by inducing ER stress. Nat Commun. 2015 Jul 31;6:7841. doi: 10.1038/ncomms8841. PubMed PMID: 26227493.
  8. Gajzer D, Ross J, Winder L, Navada S, Zhang W, Silverman L, Chaurasia P. Epigenetic and molecular signatures of cord blood CD34(+) cells treated with histone deacetylase inhibitors. Vox Sang. 2015 Jun 17. doi: 10.1111/vox.12303. [Epub ahead of print] PubMed PMID: 26084882.
  9. Tomer Y, Dolan LM, Kahaly G, Divers J, D’Agostino RB Jr, Imperatore G, Dabelea D, Marcovina S, Black MH, Pihoker C, Hasham A, Hammerstad SS, Greenberg DA, Lotay V, Zhang W, Monti MC, Matheis N; SEARCH for Diabetes in Youth Study. Genome wide identification of new genes and pathways in patients with both autoimmune thyroiditis and type 1 diabetes. J Autoimmun. 2015 Apr 27. pii: S0896-8411(15)00044-X. doi: 10.1016/j.jaut.2015.03.006. [Epub ahead of print] PubMed PMID: 25936594.
  10. Wang Z, Rajaraman P, Melin BS, Chung CC, Zhang W, McKean-Cowdin R, Michaud D, Yeager M, Ahlbom A, Albanes D, Andersson U, Freeman LE, Buring JE, Butler M, Carreón T, Feychting M, Gapstur SM, Gaziano JM, Giles GG, Hallmans G, Henriksson R, Hoffman-Bolton J, Inskip PD, Kitahara CM, Marchand LL, Linet MS, Li S, Peters  U, Purdue MP, Rothman N, Ruder AM, Sesso HD, Severi G, Stampfer M, Stevens VL, Visvanathan K, Wang SS, White E, Zeleniuch-Jacquotte A, Hoover R, Fraumeni JF,Chatterjee N, Hartge P, Chanock SJ. Further confirmation of germline glioma risk variant rs78378222 in TP53 and its implication in tumor tissues via integrative analysis of TCGA data. Hum Mutat. 2015 Apr 23. doi: 10.1002/humu.22799. [Epub ahead of print] PubMed PMID: 25907361.
  11. Sancho A, Li S, Paul T, Zhang F, Aguilo F, Vashisht A, Balasubramaniyan N, Leleiko NS, Suchy FJ, Wohlschlegel JA, Zhang W, Walsh MJ. CHD6 regulates the topological arrangement of the CFTR locus. Hum Mol Genet. 2015 Jan 28. pii: ddv032. [Epub ahead of print] PubMed PMID: 25631877
  12. Liu J, Magri L, Zhang F, Marsh NO, Albrecht S, Huynh JL, Kaur J, Kuhlmann T, Zhang W, Slesinger PA, Casaccia P. Chromatin Landscape Defined by Repressive Histone Methylation during Oligodendrocyte Differentiation. J Neurosci. 2015 Jan 7;35(1):352-65. doi: 10.1523/JNEUROSCI.2606-14.2015. PubMed PMID: 5568127; PubMed Central PMCID: PMC4287153.

2014

  1. Menon MC, Chuang PY, Li Z, Wei C, Zhang W, Luan Y, Yi Z, Xiong H, Woytovich C, Greene I, Overbey J, Rosales I, Bagiella E, Chen R, Ma M, Li L, Ding W, Djamali A, Saminego M, O’Connell PJ, Gallon L, Colvin R, Schroppel B, He JC, Murphy B, Intronic locus determines SHROOM3 expression and potentiates renal allograft fibrosisn, J Clin Invest. 2014 Dec 1. pii: 76902. doi: 10.1172/JCI76902. [Epub ahead of print]PMID:25437874
  2. Toki D, Zhang W, Hor KL, Liuwantara D, Alexander SI, Yi Z, Sharma R, Chapman JR, Nankivell BJ, Murphy B, O’Connell PJ., The Role of Macrophages in the Development of Human Renal Allograft Fibrosis in the First Year After Transplantation, American Journal of Transplantation, Volume 14, Issue 9, pages 2126-2136. PMID:25307039
  3. Levovitz C, Chen D, Ivansson E, Gyllensten U, Finnigan J, Alshawish S, Zhang W, Schadt EE, Posner MR, Genden EM, Boffetta P, Sikora AG. TGF-beta receptor 1: an immune susceptibility gene in HPV-associated cancer. Cancer Res. 2014 Oct 1. pii: canres.0602.2014. PMID:25273091
  4. Yin X, Cheng H, Lin Y, Fan X, Cui Y, Zhou F, Shen C, Zuo X, Zheng X, Zhang W, Yang S, Zhang X. Five regulatory genes detected by matching signatures of eQTL and GWAS in psoriasis J Dermatol Sci. 2014 Aug 13. pii: S0923-1811(14)00180-7. doi: 10.1016/j.jdermsci.2014.07.007. PMID:25205356
  5. Medrzycki M, Zhang Y, Zhang W, Cao K, Pan C, Lailler N, McDonald JF, Bouhassira E, Fan Y. Histone H1.3 suppresses H19 noncoding RNA expression and cell growth of ovarian cancer cells Cancer Res. 2014 Sep 9. pii: canres.2922.2013. PMID:25205099
  6. Zhong F, Chen H, Wei C, Zhang W, Li Z, Jain MK, Chuang PY, Chen H, Wang Y, Mallipattu SK, He JC. Reduced Krüppel-like factor 2 expression may aggravate the endothelial injury of diabetic nephropathy, Kidney Int. 2014 Sep 3. doi: 10.1038/ki.2014.286. [Epub ahead of print] PMID:25185079
  7. Stefan M, Wei C, Lombardi A, Li CW, Concepcion ES, Inabnet WB 3rd, Owen R, Zhang W, Tomer Y. Genetic-epigenetic dysregulation of thymic TSH receptor gene expression triggers thyroid autoimmunity, Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12562-7. doi: 10.1073/pnas.1408821111. Epub 2014 Aug 13. PMID:25122677
  8. Liu W, Wu Y, Wang L, Gao L, Wang Y, Liu X, Zhang K, Song J, Wang H, Bayer TA, Glaser L, Sun Y, Zhang W, Cutaia M, Zhang DY, Ye F. Protein signature for non-small cell lung cancer prognosis. Am J Cancer Res. 2014 May 26;4(3):256-69. eCollection 2014. PMID:24959380
  9. Vidaurre OG, Haines JD, Katz Sand I, Adula KP, Huynh JL, McGraw CA, Zhang F, Varghese M, Sotirchos E, Bhargava P, Bandaru VV, Pasinetti G, Zhang W, Inglese M, Calabresi PA, Wu G, Miller AE, Haughey NJ, Lublin FD, Casaccia P. Cerebrospinal fluid ceramides from patients with multiple sclerosis impair neuronal bioenergetics. Brain. 2014 Aug;137(Pt 8):2271-86. doi: 10.1093/brain/awu139. Epub 2014 Jun 3.PMID:24893707
  10. Bethunaickan R, Berthier CC, Zhang W, Eksi R, Li HD, Guan Y, Kretzler M, Davidson A. Identification of Stage-Specific Genes Associated With Lupus Nephritis and Response to Remission Induction in (NZB × NZW)F1 and NZM2410 Mice. Arthritis Rheumatol. 2014 Aug;66(8):2246-58. doi: 10.1002/art.38679.PMID:24757019
  11. Thakur BK, Zhang H, Becker A, Matei I, Huang Y, Costa-Silva B, Zheng Y, Hoshino A, Brazier H, Xiang J, Williams C, Rodriguez-Barrueco R, Silva JM, Zhang W, Hearn S, Elemento O, Paknejad N, Manova-Todorova K, Welte K, Bromberg J, Peinado H, Lyden D. Double-stranded DNA in exosomes: a novel biomarker in cancer detection. Cell Res. 2014 Jun;24(6):766-9. doi: 10.1038/cr.2014.44. Epub 2014 Apr 8. No abstract available. PMID:24710597
  12. Brown RS, Lombardi A, Hasham A, Greenberg DA, Gordon J, Concepcion E, Hammerstad SS, Lotay V, Zhang W, Tomer Y. Genetic analysis in young-age-of-onset Graves’ disease reveals new susceptibility loci. J Clin Endocrinol Metab. 2014 Jul;99(7):E1387-91. doi: 10.1210/jc.2013-4358. Epub 2014 Mar 31. PMID:24684463
  13. Fan Y, Wei C, Xiao W, Zhang W, Wang N, Chuang PY, He JC. Temporal Profile of the Renal Transcriptome of HIV-1 Transgenic Mice during Disease Progression. PLoS One. 2014 Mar 25;9(3):e93019. doi: 10.1371/journal.pone.0093019. eCollection 2014.PMID:24667548
  14. Kuo PY, Leshchenko VV, Fazzari MJ, Perumal D, Gellen T, He T, Iqbal J, Baumgartner-Wennerholm S, Nygren L, Zhang F, Zhang W, Suh KS, Goy A, Yang DT, Chan WC, Kahl BS, Verma AK, Gascoyne RD, Kimby E, Sander B, Ye BH, Melnick AM, Parekh S., High-resolution chromatin immunoprecipitation (ChIP) sequencing reveals novel binding targets and prognostic role for SOX11 in mantle cell lymphoma. Oncogene. 2014 Mar 31;0. doi: 10.1038/onc.2014.44. PMID:24681958
  15. Laura Magri, Victoria Swiss, Beata Jablonska, Liang Lei, Xiomara Pedre, Martin Walsh, Weijia Zhang, Vittorio Gallo, Peter Canoll, and Patrizia Casaccia, E2F1 co-regulates cell cycle genes and chromatin components during the transition of oligodendrocyte progenitors from proliferation to differentiation, Journal of Neuroscience J Neurosci. 2014 Jan 22;34(4):1481-93. PMID:24453336

2013

  1. Bethunaickan R, Berthier CC, Zhang W, Kretzler M, Davidson A. Comparative Transcriptional Profiling of 3 Murine Models of SLE Nephritis Reveals Both Unique and Shared Regulatory Networks. PLoS One. 2013 Oct 22;8(10):e77489. doi: 10.1371/journal.pone.0077489. PMID: 24167575
  2. van Oers JM, Edwards Y, Chahwan R, Zhang W, Smith C, Pechuan X, Schaetzlein S, Jin B, Wang Y, Bergman A, Scharff MD, Edelmann W. The MutSβ complex is a modulator of p53-driven tumorigenesis through its functions in both DNA double-strand break repair and mismatch repair. Oncogene. 2013 Sep 9. doi: 10.1038/onc.2013.365. PMID: 24013230
  3. Stefan M*, Zhang W*, Concepcion E, Yi Z, Tomer Y. DNA methylation profiles in type 1 diabetes twins point to strong epigenetic effects on etiology. J Autoimmun. 2013 Nov 6. doi:pii: S0896-8411(13)00133-9. 10.1016/j.jaut.2013.10.001. PMID: 24210274 *co-first author
  4. Segura MF, Fontanals-Cirera B, Gaziel-Sovran A, Guijarro MV, Hanniford D, Zhang G, González-Gomez P, Morante M, Jubierre L, Zhang W, Darvishian F, Ohlmeyer M, Osman I, Zhou MM, Hernando E. BRD4 is a new therapeutic target in melanoma Cancer Research 2013 Aug 15.PMID:23950209
  5. Cai X, Zhang W, Hu J, Zhang L, Sultana N, Wu B, Cai W, Zhou B, Cai CL. Tbx20 acts upstream of Wnt signaling to regulate endocardial cushion formation and valve remodeling during mouse cardiogenesis Development 2013 Aug;140(15):3176-87, PMID:23824573
  6. Hasham A, Zhang W, Lotay V, Haggerty S, Stefan M, Concepcion E, Dieterich DT, Tomer Y. Genetic analysis of interferon induced thyroiditis (IIT): Evidence for a key role for MHC and apoptosis related genes and pathways. J Autoimmun. 2013 Aug;44:61-70. doi: 10.1016/j.jaut.2013.04.002. Epub 2013 May 15.PMID:23683877
  7. Bechmann LP, Vetter D, Ishida J, Hannivoort RA, Lang UE, Kocabayoglu P, Fiel MI, Muñoz U, Patman GL, Ge F, Yakar S, Li X, Agius L, Lee YM, Zhang W, Hui KY, Televantou D, Schwartz GJ, LeRoith D, Berk PD, Nagai R, Suzuki T, Reeves HL, Friedman SL. Post-transcriptional activation of PPAR alpha by KLF6 in hepatic steatosis Journal of Hepatology 2013 May;58(5):1000-6, PMID:23353867

Before 2013

  1. Huber AK, Finkelman FD, Li CW, Concepcion E, Smith E, Jacobson E, Latif R, Keddache M, Zhang W, Tomer Y. Genetically Driven Target Tissue Overexpression of CD40: A Novel Mechanism in Autoimmune Disease. J Immunol. 2012 Sep 15;189(6):3043-53. Epub 2012 Aug 10. PMID:22888137
  2. Lipkowitz MS, Freedman BI, Langefeld CD, Comeau ME, Bowden DW, Kao WH, Astor BC, Bottinger EP, Iyengar SK, Klotman PE, Freedman RG, Zhang W, Parekh RS, Choi MJ, Nelson GW, Winkler CA, Kopp JB; the AASK Investigators. Apolipoprotein L1 gene variants associate with hypertension-attributed nephropathy and the rate of kidney function decline in African Americans.Kidney Int. 2012 Jul 25. doi: 10.1038/ki.2012.263. [Epub ahead of print] PMID:22832513
  3. Berthier CC, Bethunaickan R, Gonzalez-Rivera T, Nair V, Ramanujam M, Zhang W, Bottinger EP, Segerer S, Lindenmeyer M, Cohen CD, Davidson A, Kretzler M. Cross-species transcriptional network analysis defines shared inflammatory responses in murine and human lupus nephritis. J Immunol. 2012 Jul 15;189(2):988-1001. Epub 2012 Jun 20. PMID:22723521
  4. Kim Y, Fiel MI, Albanis E, Chou HI, Zhang W, Khitrov G, Friedman SL. Anti-fibrotic activity and enhanced interleukin-6 production by hepatic stellate cells in response to imatinib mesylate. Liver Int. 2012 Jul;32(6):1008-17. doi: 10.1111/j.1478-3231.2012.02806.x. Epub 2012 Apr 16. PMID:22507133
  5. Zhang G, Liu R, Zhong Y, Plotnikov AN, Zhang W, Zeng L, Rusinova E, Gerona-Nevarro G, Moshkina N, Joshua J, Chuang PY, Ohlmeyer M, He JC, Zhou MM. Down-regulation of NF-kB transcriptional activity in HIV-associated kidney disease by BRD4 inhibition. J Biol Chem. 2012 May 29. PMID:22645123
  6. Rice K., Li X., Wolniak K., Ebert B.L., Berkofsky-Fessler W., Buzzai M., Sun Y., Xi C., Elkin P., Levine R., Golub D., Gilliland D.G., Licht J.D.，Zhang W. (*)Analysis of genomic aberrations and gene expression profiling identifies novel lesions and pathways in myeloproliferative neoplasms.. Blood Cancer J. 2011 Nov;1(11):e40. doi: 10.1038/bcj.2011.39. Epub 2011 Nov 11 PMID:22829077 *corresponding author
  7. Tayo BO, Teil M, Tong L, Qin H, Khitrov G, Zhang W, Song Q, Gottesman O, Zhu X, Pereira AC, Cooper RS, Bottinger EP. Genetic background of patients from a university medical center in Manhattan: implications for personalized medicine. PLoS One. 2011 May 4;6(5):e19166. PMID:21573225
  8. Borah JC, Mujtaba S, Karakikes I, Zeng L, Muller M, Patel J, Moshkina N, Morohashi K, Zhang W, Gerona-Navarro G, Hajjar RJ, Zhou MM.A small molecule binding to the coactivator CREB-binding protein blocks apoptosis in cardiomyocytes. Chem Biol. 2011 Apr 22;18(4):531-41. PMID:21513889
  9. Bethunaickan R, Berthier CC, Ramanujam M, Sahu R, Zhang W, Sun Y, Bottinger EP, Ivashkiv L, Kretzler M, Davidson A. A unique hybrid renal mononuclear phagocyte activation phenotype in murine systemic lupus erythematosus nephritis. J Immunol. 2011 Apr 15;186(8):4994-5003. Epub 2011 Mar 16. PMID: 21411733
  10. Akeno N, Smith EP, Stefan M, Huber AK, Zhang W, Keddache M, Tomer Y. IFN-α mediates the development of autoimmunity both by direct tissue toxicity and through immune cell recruitment mechanisms. J Immunol. 2011 Apr 15;186(8):4693-706. Epub 2011 Mar 14. PMID:21402899
  11. Shtilbans A, Choi SG, Fowkes ME, Khitrov G, Shahbazi M, Ting J, Zhang W, Sun Y, Sealfon SC, Lange DJ Differential gene expression in patients with amyotrophic lateral sclerosis. Amyotroph Lateral Scler. 2011 Mar 4. PMID:21375368
  12. Berkofsky-Fessler W, Buzzai M, Kim MK, Fruchtman S, Najfeld V, Min DJ, Costa FF, Bischof JM, Soares MB, McConnell MJ, Zhang W, Levine R, Gilliland DG, Calogero R, Licht JD, Transcriptional Profiling of Polycythemia Vera Identifies Gene Expression Patterns Both Dependent and Independent from the Action of JAK2V617F. Clin Cancer Res. 2010 Aug 23. PMID: 20601445
  13. Wang D., Ye F., Sun Y., Liu H., Jiang J., Zhang Y., Liu C., Tong W., Gao L., Sun Y., Zhang W., SeeToe T., Suo J. and Zhang D.Y. Protein signatures for classification and prognosis of gastric cancer: A signaling pathway-based approach Am J Pathol. 2011 Oct;179(4):1657-66
  14. Wang Y, Zhang W, Edelmann L, Kolodner RD, Kucherlapati R, Edelmann W., Cis lethal genetic interactions attenuate and alter p53 tumorigenesis, Natl Acad Sci U S A. 2010 Mar 23;107(12):5511-5. Epub 2010 Mar 8, PMID: 20212136
  15. David Y Zhang , Fei Ye , Ling Gao, Xiaoliang Liu, Xin Zhao, Yufang Che, Hongxia Wang, Libo Wang, Josephine Wu, Dong Song, Wei Liu, Hong Xu, Bo Jiang, Weijia Zhang, Jinhua Wang and Peng Lee  Proteomics, Pathway Array and Signaling Network-Based Medicine in Cancer, Cell Division 2009, 4:20doi:10.1186/1747-1028-4-20
  16. Karakikes I, Kim M, Hadri L, Sakata S, Sun Y, Zhang W, Chemaly ER, Hajjar RJ, Lebeche D. Gene remodeling in type 2 diabetic cardiomyopathy and its phenotypic rescue with SERCA2a PLoS One. 2009 Jul 31;4(7):e6474 PMID: 19649297
  17. Fandy T.E., Herman J.G., Kerns P., Jiemjit A., Sugar E.A., Choi S., Yang A.S., Aucott T., Dauses T., Odchimar-Reissig R., Licht J., McConnell M.J., Nasrallah C., Kim M.K.H., Zhang W., Sun Y., Murgo A., Espinoza-Delgado I., Oteiza K., Owoeye I., Silverman L.R., Gore S.D., and Carraway H., Early epigenetic changes and DNA damage do not predict clinical response in an overlapping schedule of 5-azacytidine and entinostat in patients with myeloid malignancies, Blood 2009 Jun 22 PMID: 1954647
  18. Shi S, Yu L, Chiu C, Sun Y, Chen J, Khitrov G, Merkenschlager M, Holzman LB, Zhang W, Mundel P, Bottinger EP. Podocyte-Selective Deletion of Dicer Induces Proteinuria and Glomerulosclerosis, J Am Soc Nephrol. 2008 Sep 5. PMID: 1877611
  19. Mosoian A, Teixeira A, Burns CS, Khitrov G, Zhang W, Gusella L, Klotman P, Klotman M. Influence of prothymosin-alpha on HIV-1 target cells. Ann N Y Acad Sci. 2007 Sep;1112:269-85. Epub 2007 Jun 28. Review. PMID: 17600282
  20. Yang G, Zaidi M, Zhang W, Zhu LL, Li J, Iqbal J, Gross G, Phipps R, Troen BR, Sun L. Functional grouping of osteoclast genes revealed through microarray analysis Biochem Biophys Res Commun. 2007 Nov 28 PMID: 18060857
  21. Hu J, Gao J, Cao Y, Bottinger EP and  Zhang W(*). Exploiting noise in array CGH data to improve detection of gene copy number change, Nucleic Acids Research 2007; doi: 10.1093/nar/gkl730 PMID: 17272296 * corresponding author
  22. Llovet JM, Chen Y., Wurmbach E., Roayaie S., Fiel MI, Schwartz M., Thung SN, Khitrov G., Zhang W., Villanueva A., Battiston C., Mazzaferro V., Bruix J., Waxman , Friedman SL. a molecular signature to discriminate dysplastic nodules from early hepatocellular carcinoma in hcv-cirrhosis journal of Gastroenterology 2006 Dec;131(6):1758-67 PMID: 17087938
  23. Elisa Wurmbach, Ying-bei Chen, Greg Khitrov, Weijia Zhang, Sasan Roayaie, Myron Schwartz, Isabel Fiel, Swan Thung, Vincenzo Mazzaferro, Jordi Bruix, Erwin Bottinger, Scott Friedman1, Samuel Waxman1 and Josep M. Llovet, Genome-wide molecular profiles of HCV-induced dysplasia and heptatocellular carcinoma, Hepatology 2007 Apr;45(4):938-47 PMID: 17393520
  24. Ross MJ, Fan C, Ross MD, Chu TH, Shi Y, Kaufman L, Zhang W, Klotman ME, Klotman PE. HIV-1 infection initiates an inflammatory cascade in human renal tubular epithelial cells. J Acquir Immune Defic Syndr. 2006 May;42(1):1-11 PMID: 16763488
  25. Ziv S, Brenner O, Amariglio N, Smorodinsky NI, Galron R, Carrion DV, Zhang W, Sharma GG, Pandita RK, Agarwal M, Elkon R, Katzin N, Bar-Am I, Pandita TK, Kucherlapati R, Rechavi G, Shiloh Y, Barzilai A. Impaired genomic stability and increased oxidative stress exacerbate different features of Ataxia-telangiectasia. Hum Mol Genet. 2005 Oct 1;14(19):2929-43. Epub 2005 Sep 8. PMID: 16150740
  26. Wang Y, Putnam CD, Kane MF, Zhang W, Edelmann L, Russell R, Carrion DV, Chin L, Kucherlapati R, Kolodner RD, Edelmann W. Mutation in the large subunit of replication protein A results in defective DNA double-strand break repair, chromosomal instability and cancer in mice. Nat Genet. 2005 Jul;37(7):750-5. Epub 2005 Jun 19 PMID: 15965476
  27. Lin Q, Inselman A, Han X, Xu H, Zhang W, Handel MA, Skoultchi AI. Reductions in linker histone levels are tolerated in developing spermatocytes but cause changes in specific gene expression. J Biol Chem. 2004 Mar 23 PMID: 15039436
  28. Janssen E., Zhu M., Zhang W., Koonpaew S. and Zhang W. LAB: A New membrane-associated Adaptor Molecule in B Cell Activation, Nature Immunology, 4, 117 – 123 (2003). PMID: 12514734
  29. Supavekin S., Zhang W., Kucherlapati R., Kaskel F.J., Moore L.C., and Devarajan P. Differential gene expression following early renal ischemia-reperfusion. Kidney International, Vol. 63 (2003), pp. 1714–1724) PMID: 12675847.
  30. Chauhan B.K., Reed N.A., Zhang W, Duncan M.K., Kilimann M.W. and Cvekl A. Identification of genes downstream of Pax6 in the mouse lens using cDNA microarrays. J Biol Chem. 2002 Mar 29;277(13):11539-48. PMID: 11790784
  31. Zhang W., Honda S., Wang F., DiLorenzo T.P., Kalergis A.M. and Nathenson S.G.. Immunobiological analysis of TCR single chain transgenic mice revealed structures of TCR CDR3a loops in antigen recognition, Journal of Immunology, 2001 Oct 15;167(8):4396-404. PMID: 11591764
  32. Honda S., Zhang W., Kalergis A.M., Wang F., DiLorenzo T.P. and Nathenson S.G. The structural features of T cell receptor important for recognition of hapten-modified peptides. Journal of Immunology, 2001 Oct 15;167(8):4276-85. PMID: 11591750
  33. Wang F., Ono T., Kalergis A.M., Zhang W. DiLorenzo, T.P., Lim K., and Nathenson S.G. On defining the rules for interactions between the T cell recptor and its ligand: a critical role for specific amino acid residue of the T cell receptor beta chain. Proceeding of the National Academy of Sciences of the United States of America. 95(9): 5217-22, 1998 Apr 28. PMID: 9560256
  34. Kalergis A.M., Goyarts E.C., Palmieri E., Honda S., Zhang W. and Nathenson S.G. A simplified procedure for the preparation of MHC/peptide tetramers: chemical biotinylation of an unpaired cysteine engineered at the C-terminus of MHC-I. Journal of Immunological Methods. 234(1-2):61-70, 2000 Feb. PMID: 10669770