• Rareservoir: a database schema and associated tools for working with rare variant and rare disease data. Greene et al (2023).
• MitoPhen: a database of mitochondrial disease variants and patients. Ratnaike, Greene et al (2021).
• BeviMed: statistical method for performing Bayesian evaluation of variant involvement in Mendelian disease. Greene et al (2017).
• OntologyX: R packages for working with ontological data. Greene et al (2017).
• SimReg: Bayesian phenotype similarity regression for identifying associations between Human Phenotype Ontology (HPO)-coded patient phenotypes and genotypes at rare variant sites. Greene et al (2016)
• MMDIFF: software for flexible analysis of RNA-seq data using Bayesian mixed effects models. Turro et al (2014)
• MMSEQ: widely used software for Bayesian haplotype, isoform and gene specific expression estimation using multi-mapping RNA-seq reads. Turro et al (2011).
• MMBGX: a Bayesian method for estimating expression at the isoform and gene level and detecting differential splicing using whole-transcript Affymetrix arrays. Turro et al (2010).
• BGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips. Turro et al (2007).

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