{"id":1270,"date":"2021-10-27T10:44:58","date_gmt":"2021-10-27T14:44:58","guid":{"rendered":"https:\/\/labs.icahn.mssm.edu\/msdw\/?page_id=1270"},"modified":"2025-06-09T11:58:34","modified_gmt":"2025-06-09T15:58:34","slug":"leaf-application-status","status":"publish","type":"page","link":"https:\/\/labs.icahn.mssm.edu\/msdw\/leaf-application-status\/","title":{"rendered":"Leaf Application Status"},"content":{"rendered":"<p>[et_pb_section fb_built=&#8221;1&#8243; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;0px||0px||false|false&#8221;][et_pb_row _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;||||false|false&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221;][et_pb_text admin_label=&#8221;Breadcrumb&#8221; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221;]<\/p>\n<p><a href=\"https:\/\/labs.icahn.mssm.edu\/minervalab\/scientific-computing-and-data\">Scientific Computing and Data<\/a>\u00a0\/\u00a0<a href=\"https:\/\/labs.icahn.mssm.edu\/msdw\">Mount Sinai Data Warehouse<\/a> \/ <a href=\"https:\/\/leaf.mssm.edu\">Leaf<\/a> \/ Leaf Application Status and Roadmap<\/p>\n<p>[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=&#8221;1&#8243; specialty=&#8221;on&#8221; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;0px||||false|false&#8221;][et_pb_column type=&#8221;3_4&#8243; specialty_columns=&#8221;3&#8243; _builder_version=&#8221;3.25&#8243; custom_padding=&#8221;|||&#8221; custom_padding__hover=&#8221;|||&#8221;][et_pb_row_inner _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;0px||||false|false&#8221;][et_pb_column_inner saved_specialty_column_type=&#8221;3_4&#8243; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221;][et_pb_text admin_label=&#8221;Status Text&#8221; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221; header_font=&#8221;|700|||||||&#8221; header_text_color=&#8221;#221f72&#8243; header_2_text_color=&#8221;#00aeef&#8221; header_2_font_size=&#8221;24px&#8221; header_3_text_color=&#8221;#221f72&#8243; hover_enabled=&#8221;0&#8243; sticky_enabled=&#8221;0&#8243;]<\/p>\n<h1>Leaf Application Status and Roadmap<\/h1>\n<p><b>Last Updated: December 27, 2022<\/b><\/p>\n<p>&nbsp;<\/p>\n<h2>Status<\/h2>\n<p><strong>Scheduled maintenance<\/strong> to Leaf will take place on Thursday<strong>, January 11, from 5:00 to 7:00 pm, <\/strong>to fix security vulnerabilities and apply some bug fixes in critical systems software. All system access will be affected and service will be interrupted at that time. Please plan your work ahead of time and log out of the application during scheduled maintenance.<\/p>\n<p><span style=\"font-weight: 400\">Quality improvement and research users can use <\/span><a href=\"https:\/\/leaf.mssm.edu\/\"><span style=\"font-weight: 400\">Leaf<\/span><\/a><span style=\"font-weight: 400\"> to conveniently query the Mount Sinai Data Warehouse. Leaf only accesses de-identified data. <\/span><a href=\"https:\/\/labs.icahn.mssm.edu\/msdw\/leaf-tutorial\/\"><span style=\"font-weight: 400\">Documentation<\/span><\/a><span style=\"font-weight: 400\"> and <\/span><a href=\"https:\/\/scicomp.mssm.edu\/jira\/servicedesk\/customer\/portal\/14\"><span style=\"font-weight: 400\">user service<\/span><\/a><span style=\"font-weight: 400\"> are available.<\/span><\/p>\n<p><span style=\"font-weight: 400\">Leaf supports these query domains:<\/span><\/p>\n<ul>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Conditions (diagnoses) using ICD-10-CM<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Visit (encounter) locations<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Lab results using LOINC<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Medications using ATC<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Procedures using CPT4<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Demographics, such as current age, ethnicity, gender, race and vital status<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Vitals<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Patient cohorts in Sinai repositories, starting with BioMe, BioBank, the Imaging Research Warehouse 1.0, the Cancer Institute Biorepository, and Cancer Patients<\/span><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span style=\"font-weight: 400\">Leaf contains these known bugs:<\/span><\/p>\n<ul>\n<li>Patient List temporarily disabled<\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Queries that last longer than 1 minute terminate<\/span><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h2>Roadmap<\/h2>\n<p><span style=\"font-weight: 400\">These improvements to Leaf are ongoing for the first half of 2022:<\/span><\/p>\n<ul>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Fix high-priority known bugs<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Enhance the Leaf development and configuration process to make it easier to support Leaf&#8217;s users<\/span><\/li>\n<\/ul>\n<p><span style=\"font-weight: 400\">In addition, Leaf will access all improvements that are made to MSDW2.<\/span><\/p>\n<p>&nbsp;<\/p>\n<p><span style=\"font-weight: 400\">Read <\/span><a href=\"https:\/\/labs.icahn.mssm.edu\/msdw\/leaf-tutorial\/\"><span style=\"font-weight: 400\">Leaf\u2019s Tutorial<\/span><\/a><span style=\"font-weight: 400\"> for usage documentation. If you are experiencing an access issue or error within the application, please <\/span><a href=\"https:\/\/scicomp.atlassian.net\/servicedesk\/customer\/portal\/3\"><span style=\"font-weight: 400\">submit a ticket<\/span><\/a><span style=\"font-weight: 400\">.<\/span><\/p>\n<p>[\/et_pb_text][\/et_pb_column_inner][\/et_pb_row_inner][\/et_pb_column][et_pb_column type=&#8221;1_4&#8243; _builder_version=&#8221;3.25&#8243; custom_padding=&#8221;|||&#8221; custom_padding__hover=&#8221;|||&#8221;][et_pb_image src=&#8221;https:\/\/labs.icahn.mssm.edu\/msdw\/wp-content\/uploads\/sites\/350\/2021\/09\/leaf.png&#8221; title_text=&#8221;leaf&#8221; _builder_version=&#8221;4.9.0&#8243; _module_preset=&#8221;default&#8221;][\/et_pb_image][\/et_pb_column][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Scientific Computing and Data\u00a0\/\u00a0Mount Sinai Data Warehouse \/ Leaf \/ Leaf Application Status and RoadmapLeaf Application Status and Roadmap Last Updated: December 27, 2022 &nbsp; Status Scheduled maintenance to Leaf will take place on Thursday, January 11, from 5:00 to 7:00 pm, to fix security vulnerabilities and apply some bug fixes in critical systems software. [&hellip;]<\/p>\n","protected":false},"author":600,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"class_list":["post-1270","page","type-page","status-publish","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/pages\/1270","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/users\/600"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/comments?post=1270"}],"version-history":[{"count":48,"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/pages\/1270\/revisions"}],"predecessor-version":[{"id":3698,"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/pages\/1270\/revisions\/3698"}],"wp:attachment":[{"href":"https:\/\/labs.icahn.mssm.edu\/msdw\/wp-json\/wp\/v2\/media?parent=1270"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}