{"id":1444,"date":"2020-10-29T15:35:13","date_gmt":"2020-10-29T19:35:13","guid":{"rendered":"https:\/\/labs.icahn.mssm.edu\/minervalab\/?p=1444"},"modified":"2021-07-01T12:17:32","modified_gmt":"2021-07-01T16:17:32","slug":"new-high-memory-compute-nodes-are-open-on-minerva","status":"publish","type":"post","link":"https:\/\/labs.icahn.mssm.edu\/minervalab\/new-high-memory-compute-nodes-are-open-on-minerva\/","title":{"rendered":"New high memory compute nodes are open on Minerva"},"content":{"rendered":"<p>We have completed all the\u00a0tests on the\u00a0new high memory\u00a0compute nodes. Those new\u00a0nodes are added to both express and premium queues with resource -R himem needed this Thursday.<\/p>\n<p>To submit your jobs to\u00a0high memory nodes,\u00a0 make sure you add the following lines \u201c<b>#BSUB -R himem <\/b>\u201d in your LSF script or <b>-R himem<\/b>\u00a0 to your LSF command line.<\/p>\n<p>If your jobs need heavy memory per core ( for example, &gt;= 20GB per core), we highly recommend that you submit your jobs to those high memory nodes.<\/p>\n<p><u>What are the new\u00a0compute nodes\u00a0here?<\/u><\/p>\n<div><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: small\"><span style=\"color: red;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\"><b>33<\/b><\/span><span style=\"color: black;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\"><b>\u00a0high memory nodes<\/b><\/span><span style=\"color: black;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">\u00a0(<\/span><span style=\"color: black;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">1.5 TB of memory per node<\/span><span style=\"color: black;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">)<\/span><\/span><\/div>\n<ul>\n<li><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: small\"><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">48 Intel Xeon Platinum\u00a0<\/span><span style=\"color: red;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">8<\/span><span style=\"color: red;font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">268<\/span><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">\u00a02.9 GHz Processors per node, for a total of\u00a0<\/span><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">1,584<\/span><span style=\"font-family: Calibri,Helvetica,sans-serif,serif,EmojiFont;font-size: medium\">\u00a0cores<\/span><\/span><\/li>\n<\/ul>\n<p>If you have any question on this,\u00a0please send us a ticket at\u00a0<a href=\"mailto:hpchelp@hpc.mssm.edu\" target=\"_blank\" rel=\"noopener\">hpchelp@hpc.mssm.edu<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>We have completed all the\u00a0tests on the\u00a0new high memory\u00a0compute nodes. Those new\u00a0nodes are added to both express and premium queues with resource -R himem needed this Thursday. To submit your jobs to\u00a0high memory nodes,\u00a0 make sure you add the following lines \u201c#BSUB -R himem \u201d in your LSF script or -R himem\u00a0 to your LSF [&hellip;]<\/p>\n","protected":false},"author":396,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_et_pb_use_builder":"","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"categories":[1],"tags":[],"class_list":["post-1444","post","type-post","status-publish","format-standard","hentry","category-research-services"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/posts\/1444","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/users\/396"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/comments?post=1444"}],"version-history":[{"count":2,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/posts\/1444\/revisions"}],"predecessor-version":[{"id":1461,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/posts\/1444\/revisions\/1461"}],"wp:attachment":[{"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/media?parent=1444"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/categories?post=1444"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-json\/wp\/v2\/tags?post=1444"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}