[et_pb_section fb_built=”1″ admin_label=”Hero” _builder_version=”4.9.0″ background_color=”#f8fbfe” use_background_color_gradient=”on” background_color_gradient_start=”#53a0fd” background_color_gradient_end=”#4161d4″ background_color_gradient_direction=”135deg” background_image=”https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-content\/uploads\/sites\/342\/2022\/05\/block-bg-gradient-horizontal-221f72.png” parallax=”on” custom_padding=”|0px||0px|false|false” animation_style=”zoom” animation_direction=”bottom” animation_intensity_zoom=”8%” animation_starting_opacity=”100%”][et_pb_row _builder_version=”3.25″ background_size=”initial” background_position=”top_left” background_repeat=”repeat”][et_pb_column type=”4_4″ _builder_version=”3.25″ custom_padding=”|||” custom_padding__hover=”|||”][et_pb_text admin_label=”Newsroom header” _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#ffffff” text_font_size=”18px” text_line_height=”1.8em” header_font=”|700|||||||” header_font_size=”45px” header_line_height=”1.3em” header_2_font=”||||||||” text_orientation=”center” background_layout=”dark” max_width=”700px” module_alignment=”center”]<\/p>\n
A library of Scientific Computing and Data announcements, in publications, and in the news<\/p>\n
[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Developer Documentation Section” _builder_version=”4.9.0″ background_color=”#f8fbfe” custom_padding=”50px|0px|50px|0px|false|false”][et_pb_row use_custom_gutter=”on” gutter_width=”2″ _builder_version=”4.9.0″ custom_padding=”|||”][et_pb_column type=”4_4″ _builder_version=”3.25″ background_color_gradient_direction=”243deg” custom_padding=”|||” custom_padding__hover=”|||”][et_pb_text admin_label=”Announcements” _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n
Events, updates, and news from HPC, RDS, and MSDW<\/p>\n
[\/et_pb_text][et_pb_text admin_label=”2023″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center” hover_enabled=”0″ sticky_enabled=”0″]<\/p>\n
[\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” admin_label=”Announcements in 2023″ _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” hover_enabled=”0″ border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px” sticky_enabled=”0″][et_pb_accordion_item title=”March 4, 2024 – The Spring 2024 Minerva HPC and Data Ark Town Hall ” open=”on” _builder_version=”4.9.0″ body_font=”||||||||” hover_enabled=”0″ toggle_font=”|700|||||||” sticky_enabled=”0″]<\/p>\n
The Spring 2024<\/strong>\u00a0Minerva HPC and Data Ark Town Hall<\/strong> was held Tuesday, April 16, 3 pm- 4 pm.<\/strong> The slides<\/a> and presentation recording<\/a> are now available.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 2024 – Minerva Spring Training sessions” _builder_version=”4.9.0″ _module_preset=”default” hover_enabled=”0″ open=”off” sticky_enabled=”0″]<\/p>\n March 2024 – Minerva Spring Training sessions were held. Click here for access to the training materials.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 2024 – As of July 1, 2024, the Minerva chargeback rate will be $119\/TiB. ” _builder_version=”4.9.0″ _module_preset=”default” hover_enabled=”0″ open=”off” sticky_enabled=”0″]<\/p>\n As of July 1, 2024, the Minerva chargeback rate will be $119\/TiB<\/strong>. The fee will be reflected in the September 2024 charge. For any questions, please reach out to ranjini.kottaiyan@mssm.edu.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 2024 – Minerva Fall Training Sessions” _builder_version=”4.9.0″ _module_preset=”default” hover_enabled=”0″ open=”off” sticky_enabled=”0″]<\/p>\n September 2024 – Minerva Fall Training Sessions are now scheduled. Click here to register.<\/a><\/p>\n [\/et_pb_accordion_item][\/et_pb_accordion][et_pb_text admin_label=”2023″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” admin_label=”Announcements in 2023″ _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” hover_enabled=”0″ border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px” sticky_enabled=”0″][et_pb_accordion_item title=”January 6, 2023 – RDS – REDCap Scheduled Maintenance January 18″ open=”on” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||”]<\/p>\n January 6, 2023<\/strong>\u2013 Scheduled maintenance to REDCap’s production servers will take place on Wednesday, January 18, from 5:00-6:00 PM. Maintenance will implement patching on REDCap servers, which will update security vulnerabilities and apply some bug fixes in critical systems software. Access to the REDCap application and forms will be down during this period. Please plan your work ahead of time and log out of the application during maintenance.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 1, 2023 – eRAP login credentials are now synced to Mount Sinai’s Active Directory” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n \u00a0<\/strong>\u2013 eRAP login credentials are now synced to Mount Sinai’s Active Directory. Use your Mount Sinai School or Hospital login credentials to log in to eRAP. If you have difficulty logging in, please submit a ticket<\/a>. As a reminder, all users must be connected to the Mount Sinai network or MSSM Campus by either being on site or connected with VPN tunnel to log in to eRAP.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 1, 2023 \u2013 MarketScan is now available ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n A new Data Set–MarketScan–is now available on the Data Ark: Data Commons. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 2, 2023 – Minerva Spring Training ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Minerva Spring Training sessions are scheduled! Join us for Introduction to Minerva, Load Sharing Facility (LSF) Job Scheduler, and Running Jupyter Notebook and RStudio on Minerva. Click here<\/a> for details and registration information.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 3, 2023 \u2013 An introductory training session for new users of Leaf and ATLAS ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n An introductory training session for new users of Leaf and ATLAS cohort query tools will be on Thursday, February 23, from 12:00-1:00 pm. Click here for more information and to register.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 3, 2023 \u2013 An introductory training session for new users of REDCap ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n An introductory training session for new users of REDCap to set up and begin using REDCap will be on Friday, February 24, from 1:00-2:00 pm. Click here for more information and to register.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 23, 2023 – Leaf and ATLAS ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you to those who attended the introductory training session for Leaf and ATLAS cohort query tools today! Please see the PowerPoint Slide Deck<\/a> and the session’s\u00a0Video Recording<\/a>. You can review all previous session materials on our Training and Tutorials page<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 28, 2023 – REDCap Materials” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you for attending the REDCap Introductory Training on Friday, February 24. Session materials, including the session recording, are now available! Click here for more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 3, 2023 – Annual Users Survey” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you to everyone who participated in the Annual User Surveys. To see Minerva HPC’s feedback, click here<\/a>. To see Data Ark’s feedback, click here<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 8, 2023 \u2013 Computational and data science ecosystem is available for Oncology researchers ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Computational and data science ecosystem is available for Oncology researchers to gain insights to further their research. There are HP resources, EHR cohort query tools, data resources and electronic data capture systems available\u00a0here<\/a>. Expertise is available to support researchers with tools, data access, and consultations.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=” April 11, 2023- Minerva TSM Archival Storage LTO-5 Tape Solution will be out of Support on 12\/31\/2023.” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Minerva TSM Archival Storage LTO-5 Tape Solution will be out of Support on 12\/31\/2023.\u00a0 <\/strong>If you have data archived\/backed up to LTO-5 tapes (i.e.,\u00a0prior to 05\/10\/2022), you will need to retrieve and re-archive any data that you still wish to retain. See\u00a0TSM Guide<\/a> on how to retrieve and archive. For questions please reach out to hpchelp@hpc.mssm.edu<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 2, 2023 – Scientific Computing and Data make available the NSF-supported Open OnDemand service portal to access Minerva today. ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Scientific Computing and Data make available the\u00a0NSF<\/a>-supported\u00a0Open OnDemand service portal<\/a>\u00a0to access Minerva today.\u00a0This product offers a fully-compliant job management and desktop portal requiring minimal knowledge of Linux high-performance computing (HPC) environments with no end-user installation requirements other than an up-to-date web\u00a0browser (Chrome or Firefox recommended).\u00a0The service portal is accessed at URL:\u00a0https:\/\/ondemand.hpc.mssm.edu [\/et_pb_accordion_item][et_pb_accordion_item title=”December 21, 2023 – The HPC team will be on holiday schedule starting Thursday, December 21, 2023 through the end of the year. ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n The HPC team will be on holiday schedule starting Thursday, December 21, 2023 through the end of the year. During this period, the responses to the tickets (including both Minerva and Data Ark) will be slow and limited, as only one HPC staff will be on duty per day to address and respond to urgent tickets. [\/et_pb_accordion_item][et_pb_accordion_item _builder_version=”4.9.0″ _module_preset=”default” open=”off”][\/et_pb_accordion_item][\/et_pb_accordion][et_pb_text admin_label=”2022″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” admin_label=”Announcements in 2022″ _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px”][et_pb_accordion_item title=”December 28, 2022 – MSDW – Leaf and ATLAS Intro Training Courses in PEAK” open=”on” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||”]<\/p>\n December 28, 2022 \u2013\u00a0<\/strong>Interactive training courses for Leaf and ATLAS are now available in PEAK! “Leaf Application Training: Introduction<\/a>” provides an overview of Leaf access and functions, and “ATLAS Query Application Introduction Training<\/a>” navigates step-by-step instructions for beginner ATLAS users.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 15, 2022 – SCD – Dean Patricia Kovatch awarded the Jacobi Medallion Award from the Mount Sinai Alumni Association.” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/dean-patricia-kovatch-awarded-jacobi-medallion-award\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 15, 2022<\/strong> \u2013 Dean Patricia Kovatch awarded the Jacobi Medallion Award from the Mount Sinai Alumni Association. Congratulations! Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 12, 2022 – RDS – REDCap Training Session Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-redcap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 12, 2022\u00a0<\/strong>\u2013 Thank you for attending the REDCap Application Training! To review session materials, including slides and session recording, visit the \u201cREDCap Support Materials\u201d section on the\u00a0About REDCap page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 12, 2022 – RDS – eRAP Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-erap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 12, 2022 <\/strong>\u2013 Thank you for attending the eRAP Town Hall! To review session materials, including our Town Hall archive, visit the \u201ceRAP Support Materials\u201d section on the About eRAP page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 8, 2022 – RDS – REDCap Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-redcap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 8, 2022<\/strong> \u2013 Thank you for attending the REDCap Town Hall! To review session materials, including our Town Hall archive, visit the “REDCap Support Materials” section on the About REDCap page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 7, 2022 – HPC – Minerva HPC Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/resources\/the-minerva-user-group-and-training-classes\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 7, 2022<\/strong> – Thank you for attending the Minerva HPC Town Hall! To review session materials, including our Town Hall archive, visit the “Training”\u00a0 page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 2, 2022 – RDS – Data Ark Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 2, 2022<\/strong> – Thank you for attending the Data Ark: Data Commons Town Hall! To review session materials, including the session recording, visit the “Support Materials” section on the About Data Ark page<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 28, 2022 – RDS – REDCap Application Training: Dec. 9 at 2:00 PM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 28, 2022<\/strong> \u2013 REDCap Application Training will cover the functions and features of REDCap. Training is scheduled for Friday, December 9, at 2:00 PM over Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 26, 2022 – RDS – eRAP Town Hall: Dec. 9 at 12:00 PM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 22, 2022<\/strong> \u2013 eRAP Town Hall will present eRAP usage, recent accomplishments, and more! The Town Hall is scheduled for Friday, December 9, at 12:00 PM over Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 16, 2022 – HPC – NIH STRIDES and Access Major Cloud Providers” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/nih-strides-initiative-access-to-cloud-service-providers\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 16, 2022<\/strong> – Scientific Computing is helping researchers to gain access to major cloud providers such as Google Cloud Platform (GCP), Amazon Web Services (AWS) and Microsoft Azure under the NIH Science and Technology Research Infrastructure for Discovery, Experimentation, and Sustainability (STRIDES) Initiative. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 9, 2022 – MSDW – MSDW Town Hall: Nov. 17 at 12:00 PM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 9, 2022 \u2013 <\/strong>MSDW Town Hall will present Mount Sinai Data Warehouse usage, accomplishments, updates, and more! The Town Hall is scheduled for Thursday, November 17, at 12:00 PM over Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 9, 2022 – RDS – REDCap Town Hall: Dec. 8 at 2:00 PM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 9, 2022 \u2013 <\/strong>REDCap Town Hall will present REDCap usage, accomplishments, updates, and more! The Town Hall is scheduled for Thursday, December 8, at 2:00 PM over Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 8, 2022 – RDS – Data Ark Town Hall: Dec. 2 at 11:00 AM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 8, 2022\u00a0<\/strong>– Data Ark: Data Commons Town Hall will present recent activities, new data sets, 2022 usage summary, and more! The Town Hall is Friday, December 2, at 11:00 am on Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 8, 2022 – HPC – Minerva Town Hall: Dec. 7 at 12:00 PM” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 8, 2022<\/strong> – Minerva HPC Town Hall will present Minerva usage, accomplishments, updates, and more! The Town Hall is scheduled for Wednesday, December 7, at 12:00 PM over Zoom. Click here<\/a> to register and receive Zoom details.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 4, 2022 – MSDW – Epic EHR Upgrade on Nov 6″ _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n November 4, 2022 \u2013\u00a0<\/strong>Mount Sinai Hospital will upgrade Epic Electronic Health Record (EHR) on Sunday, November 6, which will result in slower than normal responsiveness from Caboodle and MSDW2 over the following two weeks while updates are processed.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”October 31, 2022 – Scientific Computing and Data Open House Nov. 1, 2-3 PM” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/scientific-computing-and-data-open-house-nov-1-2-3-pm\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n October 31, 2022 –<\/strong> You are invited to Scientific Computing and Data’s Open House on Tuesday, November 1, from 2-3 PM in Goldwurm Auditorium. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”October 10, 2022 – HPC – Fall Minerva Training Materials Online” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/resources\/the-minerva-user-group-and-training-classes\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n October 10, 2022 – Thank you for attending the Minerva training sessions this fall: Introduction to Minerva, LSF Job Scheduler, and Containerized Environment on Minerva. To review session recordings and slide decks, click here<\/a>! These materials, and an archive of past training sessions, are located on our Training page.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”October 5, 2022 – MSDW – Leaf and ATLAS Maintenance 10\/19″ _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n October 5, 2022\u00a0<\/strong>\u00a0\u2013 Scheduled maintenance to Leaf and ATLAS is scheduled for Wednesday, October 19, from 5:00-8:00 pm. All system access will be affected and service will be interrupted at that time.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 28, 2022 – MSDW – Leaf and ATLAS Application Training 10\/12″ _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n September 28, 2022<\/strong>\u00a0\u2013 A training session to utilize\u00a0Leaf<\/a>\u00a0and\u00a0ATLAS<\/a>\u00a0will be held Wednesday, October 12, from 1:00-2:00 pm.\u00a0Click here<\/a>\u00a0to register for the remote training; a Zoom link is provided following registration.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 20, 2022 – MSDW – Quarterly Update: Upgrade Releases for Leaf and ATLAS” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n September 20, 2022<\/strong> – Quarterly upgrade releases for Leaf (October 4, 2:00-5:00 pm) and ATLAS (October 5, 2:00-5:00 pm) are scheduled and system access will be affected. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 16, 2022 – HPC – Minerva Preventative Maintenance September 22″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/erap-town-hall-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n September 16, 2022 <\/strong>– A Minerva preventative maintenance (PM) for upgrading the globus server with the new trust root is scheduled for Thursday, September 22, from 1:00-5:00 PM. The globus server will be offline and all data transfer\/share through globus will be interrupted at that time.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 13, 2022 – HPC – Minerva Training and Information Sessions This Fall” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n September 13, 2022 <\/strong>– Minerva information and training sessions (Introduction to Minerva, LSF Job Scheduler, and Containerized Environment on Minerva) are scheduled for this fall. Click here<\/a> to read more and to register.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 1, 2022: MSDW – TriNetX Trainings in September” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n September 1, 2022 <\/strong>– TriNetX platform training sessions have been scheduled for the month of September. Click here<\/a> to read more and to register.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 26, 2022: MSDW – New BioMe Biobank Cohorts to MSDW Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/three-new-biome-biobank-cohorts-to-msdw-and-its-leaf-and-atlas-cohort-query-tools\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n August 26, 2022<\/strong> – Three new BioMe Biobank cohorts to MSDW and its Leaf and ATLAS cohort query tools are now available. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 23, 2022: MSDW – New Cancer Patient Cohort is Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/new-cancer-patient-cohort-available\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n August 23, 2022<\/strong> – A new Cancer Patient cohort available in MSDW, Leaf, and ATLAS. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 18, 2022: MSDW – Leaf Maintenance August 22″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/leaf-application-status\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n August 18, 2022<\/strong> – Scheduled maintenance for Leaf on Monday, August 22, from 12:00 to 1:00 pm will implement a newly “pre-calculated” cancer patient cohort for use in Leaf queries. Click here<\/a> to read more<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 3, 2022: MSDW – TriNetX Trainings in August” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/trinetx-training-sessions-in-august\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n August 3, 2022\u00a0<\/strong>– TriNetX platform training sessions have been scheduled for the month of August. Click here<\/a> to read more and to register.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 28, 2022: HPC- Minerva PM for LSF Job Scheduler August 15″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/minerva-lsf-job-scheduler-maintenance-august-15-100-600-pm\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n July 28, 2022 –<\/strong> A Minerva preventative maintenance (PM) for LSF (Load Sharing Facility) job scheduler upgrade is scheduled for 5 hours, 1:00-6:00 PM, on Monday, August 15, 2022. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 26, 2022: MSDW – Updates to Leaf features August 9″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/notice-new-leaf-release-live-august-9\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n July 26, 2022<\/strong> – Scheduled maintenance for Leaf on Tuesday, August 9, from 10:30 am to 6:30 pm will implement new application features. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 19, 2022: HPC – Updates on Minerva Login July 26″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/notice-updates-to-minerva-login\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n July 19, 2022 <\/strong>\u2013 We will be changing one of the SSH host keys on the Minerva login notes at 1:00 PM on Tuesday, July 26. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 19, 2022: RDS – New Data Ark Data Sets Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/new-genomic-data-sets-now-available-on-the-data-ark-data-commons\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n July 19, 2022 <\/strong>\u2013 \u00a0New genomic data sets are now available on the Data Ark Data Commons.\u00a0Click here<\/a>\u00a0to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 18, 2022: MSDW – TriNetX Training Sessions in July” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/trinetx-training-sessions-in-july\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n July 18, 2022 <\/strong>\u2013 TriNetX platform training sessions have been scheduled for the month of July and are open for registration. Click here<\/a>\u00a0to read more and to register.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 24, 2022: MSDW – ATLAS Scheduled Maintenance on Wednesday, June 29″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/erap-town-hall-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 24, 2022\u00a0<\/strong>\u2013 ATLAS will be down for scheduled maintenance on Wednesday, June 29, from 3:00 to 6:00 pm. All system access will be affected and service will be interrupted at that time. Please plan your work ahead of time and log out of the application during maintenance.\u00a0Click here<\/a>\u00a0for more information.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 22, 2022: MSDW – MSDW’s 2022 charge rate is $180\/hour for Custom MSDW Data Requests” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/erap-town-hall-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 22, 2022<\/strong> – MSDW’s 2022 charge rate is $180\/hour for Custom MSDW Data Requests. Click here<\/a> to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 16, 2022: HPC – Minerva\u2019s 2022 charge rate is $100\/TiB per year for high-performance online parallel file system storage.” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/minerva-charge-rate-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 16, 2022<\/strong> \u2013 Minerva\u2019s 2022 charge rate is $100\/TiB per year for high-performance online parallel file system storage. This includes all Minerva services, including CPU, GPU and archival storage. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 16, 2022: RDS – REDCap\u2019s 2022 charge rate is $200\/year per database in production, and $140\/hour consulting fee for project-specific development or services” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/redcap-charge-rate-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 16, 2022<\/strong>\u00a0\u2013 REDCap\u2019s 2022 charge rate is $200\/year per database in production, and $140\/hour consulting fee for project-specific development or services.\u00a0Click here<\/a>\u00a0to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 16, 2022: RDS – eRAP\u2019s 2022 charge rate is $140\/hour for new project development or changes to existing project functionality” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/erap-charge-rate-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 16, 2022<\/strong>\u00a0\u2013 eRAP\u2019s 2022 charge rate is $140\/hour for new project development or changes to existing project functionality.\u00a0Click here<\/a>\u00a0to read more.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 13, 2022: MSDW – TriNetX application training sessions for the month of June are open for registration” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/trinetx-training-sessions-in-june\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 13, 2022<\/strong>\u00a0\u2013 TriNetX application training sessions for the month of June are open for registration.\u00a0Click here<\/a> for session details and registration information.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”June 8, 2022: HPC – Scheduled Maintenance Thursday, June 9: Web01 and RStudio ” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/scheduled-maintenance-thursday-june-9-web01-and-rstudio\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n June 8, 2022 <\/strong>\u2013 Web01 and Rstudio Scheduled Maintenance on Thursday, June 9. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 31, 2022: MSDW – MSDW Town Hall Slides Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/wp-content\/uploads\/sites\/350\/2022\/05\/MSDW-TownHall_2022-05-27.pdf” toggle_font=”|700|||||||” open=”off”]<\/p>\n May 31, 2022 <\/strong>\u2013 Thank you for attending the MSDW Town Hal on May 27! Click here<\/a>\u00a0for the slide deck from the Town Hall presentation.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 26, 2022: RDS – REDCap Town Hall Slides Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-content\/uploads\/sites\/342\/2022\/05\/REDCap-Town-Hall-2022.pdf” toggle_font=”|700|||||||” open=”off”]<\/p>\n May 26, 2022 <\/strong>\u2013 Thank you for attending the REDCap Town Hal on May 26! Click here<\/a>\u00a0for the slide deck from the Town Hall presentation.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 25, 2022: RDS – Data Ark Town Hall Slides Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-content\/uploads\/sites\/342\/2022\/05\/Data-Ark-Townhall_052522.pptx.pdf” toggle_font=”|700|||||||” open=”off”]<\/p>\n May 25, 2022\u00a0<\/strong>\u2013 Thank you for attending the Data Ark town hall on May 25!\u00a0Click here<\/a>\u00a0for the slide deck from the Town Hall presentation.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 23, 2022: RDS – eRAP Town Hall Slides Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/wp-content\/uploads\/sites\/342\/2022\/05\/eRAP-Town-Hall-05-2022.pdf” toggle_font=”|700|||||||” open=”off”]<\/p>\n Thank you for attending the eRAP Town Hall on May 20! Click here<\/a> for the slide deck from the Town Hall presentation.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 20, 2022: RDS – Data Ark Town Hall on May 25″ _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n Data Ark Town Hall will be on Wednesday, May 25, at 12:00 PM. Click here to register<\/a>; Zoom details provided following registration.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 13, 2022: RDS – eRAP Town Hall on May 20″ _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n eRAP Town Hall will be on Friday, May 20, at 1:00 PM. Click here to register<\/a>; Zoom details provided following registration.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 13, 2022: MSDW – MSDW Town Hall on May 27″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/msdw-town-hall-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n MSDW Town Hall will be on Friday, May 27, at 12:00 PM. Click here to register<\/a>; Zoom details provided following registration.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 12, 2022: RDS – REDCap Town Hall on May 26″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/redcap-town-hall-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n \u00a0<\/strong>REDCap Town Hall will be on Thursday, May 26, at 12:00 PM.\u00a0Click here to register<\/a>; Zoom details provided following registration.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”May 3, 2022: MSDW – BioMe and IRW 1.0 now in Leaf” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/biome-irw-2022\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n Self-service cohort building now available for BioMe<\/em>\u00a0and the Imaging Research Warehouse 1.0.\u00a0Click here<\/a>\u00a0for more information.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”April 8, 2022: HPC – Introduction and LSF Job Scheduler Training Materials” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/resources\/the-minerva-user-group-and-training-classes\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n Thank you for attending Introduction to Minerva (April 1) and LSF Job Scheduler (April 8) training! Session recordings and slides are posted; click here to review<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”April 5, 2022: HPC – New A100-80GB GPU Nodes Available on Minerva” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/new-a100-80gb-gpu-nodes\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n New A100-80GB GPU Nodes Available on Minerva. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 9, 2022: HPC – Minerva Training Sessions in April 2022″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/new-a100-80gb-gpu-nodes\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n High Performance Computing will be holding 2 information\/training sessions this April. These sessions are intended to familiarize you with the Minerva environment. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”January 6, 2022: HPC – Scheduled Maintenance: January 20, 2022″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/new-a100-80gb-gpu-nodes\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n A full Planned Maintenance (PM) is in scheduled for Thursday, January 20, 2022, from 1:00 pm to 8:00 pm. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][\/et_pb_accordion][et_pb_text admin_label=”2021″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px”][et_pb_accordion_item title=”December 13, 2021: MSDW – Transition for CQT Effective December 20, 2021″ open=”on” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/msdw\/transition-for-cqt-effective-december-20-2021\/” toggle_level=”h4″ toggle_font=”|700|||||||”]<\/p>\n To provide the Mount Sinai Community with the very best data and resources to query the data, the Scientific Computing and Data team has been implementing improved infrastructure in the Mount Sinai Data Warehouse. In 2021, we debuted \u201cMSDW2,\u201d based on the\u00a0OMOP Common Data Model,<\/a> containing Epic data from throughout the Mount Sinai Health System, and unveiled two self-service query tools for defining and generating patient cohorts: Leaf and ATLAS. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”November 10, 2021: HPC – Scheduled Maintenance: November 15, 2021″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/scheduled-downtime-november-15-2021\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n There will be scheduled updates on Monday, November 15, from 3:00 pm to 5:00 pm to update packages on web01 (*.u.hpc.mssm.edu), rstudio-connect, and globus servers. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 16, 2021: HPC – Dean Kovatch Chairs Computational Approaches for Cancer Workshop” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/dean-kovatch-hosts-computational-approaches-for-cancer-workshop\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n Patricia Kovatch, Dean of Scientific Computing and Data, will present and will chair sessions at this fall\u2019s Supercomputing 2021 conference. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 7, 2021: HPC – CATS Coming Soon” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/cats-coming-soon\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n The COVID and Translational Science supercomputer (CATS) was awarded in 2021\u00a0 to enable new kinds of scientific discovery and translation related to the newly emerged COVID-19 pandemic. CATS will be in production in 4Q21 with 2,640 Intel cores, 82 TB of memory and 17 petabytes of storage. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 31, 2021: HPC – Minerva Training\/Information Sessions in September 2021″ _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/minerva-training-information-sessions-in-september-2021\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n We will host three information\/training sessions intended to familiarize you with the Minerva environment. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”July 16, 2021: HPC – Two Interactive V100 GPU Modules Now Live” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/two-interactive-v100-gpu-modules-now-live\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n We have added another V100 GPU node to the dedicated interactive GPU node pool which you can use for your GPU job testing. In total, we have\u00a02<\/strong> dedicated interactive GPU nodes (lg03a01 & lg03a02 with 4 V100 GPUs on each) in the interactive queue now. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][\/et_pb_accordion][et_pb_text admin_label=”2020″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px”][et_pb_accordion_item title=”October 29, 2020: HPC – New high memory compute nodes are open on Minerva” open=”on” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/new-high-memory-compute-nodes-are-open-on-minerva\/” toggle_level=”h4″ toggle_font=”|700|||||||”]<\/p>\n We have completed all the tests on the new high memory compute nodes. Those new nodes are added to both express and premium queues with resource -R himem needed this Thursday. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”September 25, 2020: HPC – Minerva expansion: more storage, high memory nodes, and A100 GPU nodes” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/minerva-expansion-more-storage-high-memory-nodes-and-a100-gpu-nodes\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n Thanks to a donor, we\u2019re happy to announce that we will be expanding Minerva with new high memory nodes, A100 GPU nodes, and high-speed storage.\u00a0\u00a0After the installation, we will have a total of\u00a0<\/b>434 nodes for a total of 20,832<\/b>\u00a0cores, and\u00a0<\/b>21<\/b> petabytes of usable storage.\u00a0<\/b>Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 24, 2020: HPC – Rstudio Connect server is available on Minerva” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rstudio-connect-server-is-available-on-minerva\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n Rstudio Connect server is available on Minerva, where you can publish Shiny, R Markdown and Jupyter for collaborators or others. Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”January 7, 2020: HPC – Editors\u2019 Choice Award for Best Use of High Performance Data Analytics & Artificial Intelligence for their development of an AI platform to detect neurodegenerative diseases using machine learning” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/www.hpcwire.com\/2020\/01\/07\/hpcwire-awards-highlight-supercomputing-achievements-in-the-sciences-2\/” toggle_level=”h4″ toggle_font=”|700|||||||” open=”off”]<\/p>\n Researchers at Mount Sinai Hospital collaborated with Minerva HPC and won the Editors\u2019 Choice Award for Best Use of High Performance Data Analytics & Artificial Intelligence\u00a0<\/b><\/a>for their development of an AI platform to detect neurodegenerative diseases using machine learning. The platform, called the Precise Informatics Platform, analyzed digitized microscopic slides of tissue samples to create a convolutional neural network capable of identifying \u201ctangles\u201d that serve as markers for neurodegenerative diseases. \u201cThank you @hpcwire for the #hpcwire Editors\u2019 Choice Award,\u201d Minerva HPC tweeted. \u201cWe couldn\u2019t be more proud of our researchers and partners @Lenovo who have worked so hard.\u201d Read the full article here.<\/a><\/p>\n [\/et_pb_accordion_item][\/et_pb_accordion][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_2,1_2″ use_custom_gutter=”on” gutter_width=”2″ _builder_version=”4.9.0″ custom_padding=”|||”][et_pb_column type=”1_2″ _builder_version=”4.9.0″ _module_preset=”default”][\/et_pb_column][et_pb_column type=”1_2″ _builder_version=”3.25″ background_color_gradient_direction=”243deg” custom_padding=”|||” custom_padding__hover=”|||”][et_pb_text admin_label=”Announcements” _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n Events, updates, and news from HPC, RDS, and MSDW<\/p>\n [\/et_pb_text][et_pb_text admin_label=”2023″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” admin_label=”Announcements in 2023″ _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px”][et_pb_accordion_item title=”January 6, 2023 – RDS – REDCap Scheduled Maintenance January 18″ open=”on” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||”]<\/p>\n January 6, 2023<\/strong>\u2013 Scheduled maintenance to REDCap’s production servers will take place on Wednesday, January 18, from 5:00-6:00 PM. Maintenance will implement patching on REDCap servers, which will update security vulnerabilities and apply some bug fixes in critical systems software. Access to the REDCap application and forms will be down during this period. Please plan your work ahead of time and log out of the application during maintenance.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 1, 2023 – eRAP login credentials are now synced to Mount Sinai’s Active Directory” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n \u00a0<\/strong>\u2013 eRAP login credentials are now synced to Mount Sinai’s Active Directory. Use your Mount Sinai School or Hospital login credentials to log in to eRAP. If you have difficulty logging in, please submit a ticket<\/a>. As a reminder, all users must be connected to the Mount Sinai network or MSSM Campus by either being on site or connected with VPN tunnel to log in to eRAP.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 1, 2023 \u2013 MarketScan is now available ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n A new Data Set–MarketScan–is now available on the Data Ark: Data Commons. Click here to read more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 2, 2023 – Minerva Spring Training ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Minerva Spring Training sessions are scheduled! Join us for Introduction to Minerva, Load Sharing Facility (LSF) Job Scheduler, and Running Jupyter Notebook and RStudio on Minerva. Click here<\/a> for details and registration information.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 3, 2023 \u2013 An introductory training session for new users of Leaf and ATLAS ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n An introductory training session for new users of Leaf and ATLAS cohort query tools will be on Thursday, February 23, from 12:00-1:00 pm. Click here for more information and to register.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 3, 2023 \u2013 An introductory training session for new users of REDCap ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n An introductory training session for new users of REDCap to set up and begin using REDCap will be on Friday, February 24, from 1:00-2:00 pm. Click here for more information and to register.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 23, 2023 – Leaf and ATLAS ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you to those who attended the introductory training session for Leaf and ATLAS cohort query tools today! Please see the PowerPoint Slide Deck<\/a> and the session’s\u00a0Video Recording<\/a>. You can review all previous session materials on our Training and Tutorials page<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”February 28, 2023 – REDCap Materials” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you for attending the REDCap Introductory Training on Friday, February 24. Session materials, including the session recording, are now available! Click here for more<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 3, 2023 – Annual Users Survey” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Thank you to everyone who participated in the Annual User Surveys. To see Minerva HPC’s feedback, click here<\/a>. To see Data Ark’s feedback, click here<\/a>.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”March 8, 2023 \u2013 Computational and data science ecosystem is available for Oncology researchers ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Computational and data science ecosystem is available for Oncology researchers to gain insights to further their research. There are HP resources, EHR cohort query tools, data resources and electronic data capture systems available\u00a0here<\/a>. Expertise is available to support researchers with tools, data access, and consultations.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=” April 11, 2023- Minerva TSM Archival Storage LTO-5 Tape Solution will be out of Support on 12\/31\/2023.” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Minerva TSM Archival Storage LTO-5 Tape Solution will be out of Support on 12\/31\/2023.\u00a0 <\/strong>If you have data archived\/backed up to LTO-5 tapes (i.e.,\u00a0prior to 05\/10\/2022), you will need to retrieve and re-archive any data that you still wish to retain. See\u00a0TSM Guide<\/a> on how to retrieve and archive. For questions please reach out to hpchelp@hpc.mssm.edu<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”August 2, 2023 – Scientific Computing and Data make available the NSF-supported Open OnDemand service portal to access Minerva today. ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n Scientific Computing and Data make available the\u00a0NSF<\/a>-supported\u00a0Open OnDemand service portal<\/a>\u00a0to access Minerva today.\u00a0This product offers a fully-compliant job management and desktop portal requiring minimal knowledge of Linux high-performance computing (HPC) environments with no end-user installation requirements other than an up-to-date web\u00a0browser (Chrome or Firefox recommended).\u00a0The service portal is accessed at URL:\u00a0https:\/\/ondemand.hpc.mssm.edu [\/et_pb_accordion_item][et_pb_accordion_item title=”December 21, 2023 – The HPC team will be on holiday schedule starting Thursday, December 21, 2023 through the end of the year. ” _builder_version=”4.9.0″ _module_preset=”default” open=”off”]<\/p>\n The HPC team will be on holiday schedule starting Thursday, December 21, 2023 through the end of the year. During this period, the responses to the tickets (including both Minerva and Data Ark) will be slow and limited, as only one HPC staff will be on duty per day to address and respond to urgent tickets. [\/et_pb_accordion_item][et_pb_accordion_item _builder_version=”4.9.0″ _module_preset=”default” open=”off”][\/et_pb_accordion_item][\/et_pb_accordion][et_pb_text admin_label=”2022″ _builder_version=”4.9.0″ text_font=”||||||||” text_text_color=”#959baf” text_font_size=”18px” text_line_height=”1.8em” header_font=”||||||||” header_2_font=”|700|||||||” header_2_text_color=”#221f72″ header_2_font_size=”24px” header_2_line_height=”1.3em” header_3_font=”|700|||||||” header_3_text_color=”#535b7c” header_3_font_size=”25px” header_3_line_height=”1.3em” module_alignment=”center”]<\/p>\n [\/et_pb_text][et_pb_accordion open_toggle_background_color=”#ffffff” closed_toggle_background_color=”#ffffff” icon_color=”rgba(83,91,124,0.4)” admin_label=”Announcements in 2022″ _builder_version=”4.9.0″ toggle_text_color=”#535b7c” toggle_level=”h3″ toggle_font=”Roboto Mono|700|||||||” toggle_text_align=”left” toggle_font_size=”18px” body_font=”Roboto Mono||||||||” body_text_color=”#989db0″ body_font_size=”13px” custom_margin=”||100px|” custom_padding=”|||” border_radii=”on|4px|4px|4px|4px” border_width_all=”0px” border_color_all=”#d9d9d9″ border_style_all=”solid” box_shadow_style=”preset3″ box_shadow_color=”rgba(34,56,101,0.12)” use_border_color=”on” border_width=”0px”][et_pb_accordion_item title=”December 28, 2022 – MSDW – Leaf and ATLAS Intro Training Courses in PEAK” open=”on” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||”]<\/p>\n December 28, 2022 \u2013\u00a0<\/strong>Interactive training courses for Leaf and ATLAS are now available in PEAK! “Leaf Application Training: Introduction<\/a>” provides an overview of Leaf access and functions, and “ATLAS Query Application Introduction Training<\/a>” navigates step-by-step instructions for beginner ATLAS users.<\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 15, 2022 – SCD – Dean Patricia Kovatch awarded the Jacobi Medallion Award from the Mount Sinai Alumni Association.” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/dean-patricia-kovatch-awarded-jacobi-medallion-award\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 15, 2022<\/strong> \u2013 Dean Patricia Kovatch awarded the Jacobi Medallion Award from the Mount Sinai Alumni Association. Congratulations! Click here to read more.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 12, 2022 – RDS – REDCap Training Session Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-redcap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 12, 2022\u00a0<\/strong>\u2013 Thank you for attending the REDCap Application Training! To review session materials, including slides and session recording, visit the \u201cREDCap Support Materials\u201d section on the\u00a0About REDCap page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 12, 2022 – RDS – eRAP Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-erap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 12, 2022 <\/strong>\u2013 Thank you for attending the eRAP Town Hall! To review session materials, including our Town Hall archive, visit the \u201ceRAP Support Materials\u201d section on the About eRAP page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 8, 2022 – RDS – REDCap Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/rds\/about-redcap\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 8, 2022<\/strong> \u2013 Thank you for attending the REDCap Town Hall! To review session materials, including our Town Hall archive, visit the “REDCap Support Materials” section on the About REDCap page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 7, 2022 – HPC – Minerva HPC Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” link_option_url=”https:\/\/labs.icahn.mssm.edu\/minervalab\/resources\/the-minerva-user-group-and-training-classes\/” toggle_font=”|700|||||||” open=”off”]<\/p>\n December 7, 2022<\/strong> – Thank you for attending the Minerva HPC Town Hall! To review session materials, including our Town Hall archive, visit the “Training”\u00a0 page.<\/a><\/p>\n [\/et_pb_accordion_item][et_pb_accordion_item title=”December 2, 2022 – RDS – Data Ark Town Hall Materials Available” _builder_version=”4.9.0″ body_font=”||||||||” toggle_font=”|700|||||||” open=”off”]<\/p>\n2023<\/h2>\n
<\/a>Documentation is available at\u00a0here<\/a><\/p>\n
Thanks for your understanding, and we wish you a good holiday!<\/p>\n2022<\/h2>\n
2021<\/h2>\n
2020<\/h2>\n
Announcements<\/h2>\n
2023<\/h2>\n
<\/a>Documentation is available at\u00a0here<\/a><\/p>\n
Thanks for your understanding, and we wish you a good holiday!<\/p>\n2022<\/h2>\n