System Software |
Applications |
| Load Sharing Facility (LSF) Scheduler | Amber11 |
| General Parallel File System (GPFS) | Gromacs |
| Intel Parallel Studio XE (Fortran and C/C++ compilers, Vtune, Parallel Advisor, etc) | NAMD |
| OpenMPI | Matlab |
| git, svn, cvs, etc. | R |
| sftp, wsftp, rsync, GridFTP | Autodock |
| Web Services | Modeller |
| MySQL | Rosetta |
| Modules | GATK |
| Libraries | Gaussian09 |
| LAPACK | VMD |
| Boost | xmgrace |
| FFTw | gnuplot |
| SciPy, NumPy | – |
| GSL | – |
| HDF5 | – |
| Intel Math Kernel Library (MKL) | – |
| AMD Core Math Library (ACML) | – |
