{"id":122,"date":"2015-02-27T19:00:36","date_gmt":"2015-02-28T00:00:36","guid":{"rendered":"http:\/\/labs.icahn.mssm.edu\/clark-lab\/?p=122"},"modified":"2017-12-16T15:04:10","modified_gmt":"2017-12-16T15:04:10","slug":"online-brain-atlases","status":"publish","type":"post","link":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/online-brain-atlases\/","title":{"rendered":"Online brain atlases (MRI, human)"},"content":{"rendered":"<p>So you&#8217;re in the market for a good interactive MRI brain atlas that&#8217;s free and available online, are you&#8230;?\u00a0\u00a0 Well, look no further!\u00a0 We can suggest two very solid options for you.<\/p>\n<p>Harvard University has a relatively good atlas <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/caseNA\/pb9.htm\" target=\"_blank\" rel=\"noopener\">located here<\/a>.\u00a0 In addition to the atlas, the rest of their <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/home.html\" target=\"_blank\" rel=\"noopener\">website<\/a> is worth some browsing.\u00a0 They have a ton of MRI images, characterizing various neurological conditions (e.g., <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/case14\/mr1-tc1\/010.html\" target=\"_blank\" rel=\"noopener\">AIDS dementia<\/a>, <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/caseNN1\/mr1-dg1\/015.htm\" target=\"_blank\" rel=\"noopener\">Alzheimer&#8217;s disease<\/a>, <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/case38\/mr1\/013.html\" target=\"_blank\" rel=\"noopener\">Multiple sclerosis<\/a>, <a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/case11\/mr1-tc1\/011.html\" target=\"_blank\" rel=\"noopener\">Huntington&#8217;s disease<\/a>,\u00a0<a href=\"http:\/\/www.med.harvard.edu\/aanlib\/cases\/case41\/mr1\/013.html\" target=\"_blank\" rel=\"noopener\">Toxoplasmosis<\/a>, etc.) using a variety of imaging modalities (T1, T2, SPECT, etc.).<\/p>\n<p>Michigan State University&#8217;s <a href=\"https:\/\/www.msu.edu\/~brains\/brains\/human\/index.html\" target=\"_blank\" rel=\"noopener\">online atlas<\/a> is also very good.\u00a0 Once you click on an &#8220;MRI&#8221; image, you can click on the &#8220;labeled&#8221; link to see labeled structures in that slice.\u00a0 MRI images are shown with corresponding stained whole brain sections that are also labeled.\u00a0 They also have a database of QuickTime movies that allow you to examine the brain, slice by slice, in various planes.<\/p>\n<p>Happy viewing!<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>So you&#8217;re in the market for a good interactive MRI brain atlas that&#8217;s free and available online, are you&#8230;?\u00a0\u00a0 Well, look no further!\u00a0 We can suggest two very solid options for you. Harvard University has a relatively good atlas located here.\u00a0 In addition to the atlas, the rest of their website is worth some browsing.\u00a0 [&hellip;]<\/p>\n","protected":false},"author":26,"featured_media":375,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[5],"class_list":["post-122","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized","tag-mri","debut-has-thumb"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/posts\/122","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/users\/26"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/comments?post=122"}],"version-history":[{"count":2,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/posts\/122\/revisions"}],"predecessor-version":[{"id":381,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/posts\/122\/revisions\/381"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/media\/375"}],"wp:attachment":[{"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/media?parent=122"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/categories?post=122"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/labs.icahn.mssm.edu\/clark-lab\/wp-json\/wp\/v2\/tags?post=122"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}